Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC44A1Q8WWI5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 AC026471.6-201ENST00000622954 1905 ntBASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 AC239859.2-201ENST00000444165 318 ntBASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 AF106564.1-201ENST00000607058 2553 ntBASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC44A1Q8WWI5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
SLC44A1Q8WWI5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
SLC44A1Q8WWI5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SLC44A1Q8WWI5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
SLC44A1Q8WWI5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC44A1Q8WWI5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC44A1Q8WWI5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC44A1Q8WWI5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC44A1Q8WWI5 TSPY9P-201ENST00000440215 945 ntBASIC21.64■■□□□ 1.05
SLC44A1Q8WWI5 TSPY11P-201ENST00000442607 1045 ntBASIC21.64■■□□□ 1.05
SLC44A1Q8WWI5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC44A1Q8WWI5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC44A1Q8WWI5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SLC44A1Q8WWI5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SLC44A1Q8WWI5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC44A1Q8WWI5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC44A1Q8WWI5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SLC44A1Q8WWI5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 AL117332.1-201ENST00000622628 974 ntBASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 AC241377.3-202ENST00000626088 1088 ntBASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 AC241585.3-202ENST00000628937 1088 ntBASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 AC245100.8-202ENST00000629247 1058 ntBASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC44A1Q8WWI5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 AC133637.1-201ENST00000624115 1537 ntBASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 AL451085.2-201ENST00000605085 799 ntBASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC44A1Q8WWI5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A1Q8WWI5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
SLC44A1Q8WWI5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SLC44A1Q8WWI5 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC44A1Q8WWI5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A1Q8WWI5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A1Q8WWI5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A1Q8WWI5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A1Q8WWI5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A1Q8WWI5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC44A1Q8WWI5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
SLC44A1Q8WWI5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
SLC44A1Q8WWI5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms