Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT78Q8N1N4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT78Q8N1N4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT78Q8N1N4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT78Q8N1N4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT78Q8N1N4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
KRT78Q8N1N4 AC027682.1-201ENST00000562846 899 ntBASIC20.84■□□□□ 0.93
KRT78Q8N1N4 AC008764.7-201ENST00000593779 1081 ntBASIC20.84■□□□□ 0.93
KRT78Q8N1N4 AL355001.2-201ENST00000620617 1191 ntBASIC20.84■□□□□ 0.93
KRT78Q8N1N4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KRT78Q8N1N4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
KRT78Q8N1N4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT78Q8N1N4 OR7E47P-201ENST00000546390 1422 ntBASIC20.84■□□□□ 0.93
KRT78Q8N1N4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.84■□□□□ 0.93
KRT78Q8N1N4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KRT78Q8N1N4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT78Q8N1N4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.83■□□□□ 0.93
KRT78Q8N1N4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
KRT78Q8N1N4 AC133561.4-201ENST00000566112 224 ntBASIC20.83■□□□□ 0.93
KRT78Q8N1N4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.83■□□□□ 0.93
KRT78Q8N1N4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT78Q8N1N4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT78Q8N1N4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT78Q8N1N4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.83■□□□□ 0.93
KRT78Q8N1N4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.83■□□□□ 0.92
KRT78Q8N1N4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRT78Q8N1N4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRT78Q8N1N4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
KRT78Q8N1N4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
KRT78Q8N1N4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT78Q8N1N4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT78Q8N1N4 AC099791.1-201ENST00000416440 715 ntBASIC20.81■□□□□ 0.92
KRT78Q8N1N4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.81■□□□□ 0.92
KRT78Q8N1N4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.81■□□□□ 0.92
KRT78Q8N1N4 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.81■□□□□ 0.92
KRT78Q8N1N4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT78Q8N1N4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT78Q8N1N4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
KRT78Q8N1N4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 AP001330.3-201ENST00000520123 633 ntBASIC20.8■□□□□ 0.92
KRT78Q8N1N4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT78Q8N1N4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT78Q8N1N4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT78Q8N1N4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT78Q8N1N4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.79■□□□□ 0.92
KRT78Q8N1N4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT78Q8N1N4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT78Q8N1N4 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.79■□□□□ 0.92
KRT78Q8N1N4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.79■□□□□ 0.92
KRT78Q8N1N4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.79■□□□□ 0.92
KRT78Q8N1N4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT78Q8N1N4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT78Q8N1N4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 C11orf96-202ENST00000528572 1834 ntBASIC20.78■□□□□ 0.92
KRT78Q8N1N4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 IGHV3-19-201ENST00000521488 291 ntBASIC20.78■□□□□ 0.92
KRT78Q8N1N4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT78Q8N1N4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms