Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scube3Q66PY1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.08■□□□□ 0.81
Scube3Q66PY1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scube3Q66PY1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Scube3Q66PY1 Gm7860-201ENSMUST00000121190 879 ntBASIC20.08■□□□□ 0.81
Scube3Q66PY1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.08■□□□□ 0.81
Scube3Q66PY1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scube3Q66PY1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scube3Q66PY1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.08■□□□□ 0.81
Scube3Q66PY1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Scube3Q66PY1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scube3Q66PY1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scube3Q66PY1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scube3Q66PY1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scube3Q66PY1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scube3Q66PY1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.07■□□□□ 0.8
Scube3Q66PY1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.07■□□□□ 0.8
Scube3Q66PY1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scube3Q66PY1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
Scube3Q66PY1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scube3Q66PY1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scube3Q66PY1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scube3Q66PY1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scube3Q66PY1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.06■□□□□ 0.8
Scube3Q66PY1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scube3Q66PY1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Scube3Q66PY1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scube3Q66PY1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scube3Q66PY1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.06■□□□□ 0.8
Scube3Q66PY1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scube3Q66PY1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scube3Q66PY1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scube3Q66PY1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scube3Q66PY1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scube3Q66PY1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scube3Q66PY1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Scube3Q66PY1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scube3Q66PY1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scube3Q66PY1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Scube3Q66PY1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scube3Q66PY1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scube3Q66PY1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scube3Q66PY1 Gm42569-201ENSMUST00000200539 472 ntBASIC20.05■□□□□ 0.8
Scube3Q66PY1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Scube3Q66PY1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.05■□□□□ 0.8
Scube3Q66PY1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scube3Q66PY1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scube3Q66PY1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scube3Q66PY1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scube3Q66PY1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scube3Q66PY1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Scube3Q66PY1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scube3Q66PY1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scube3Q66PY1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scube3Q66PY1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scube3Q66PY1 Gm10849-201ENSMUST00000100397 618 ntBASIC20.04■□□□□ 0.8
Scube3Q66PY1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.04■□□□□ 0.8
Scube3Q66PY1 Gm29257-201ENSMUST00000186115 639 ntBASIC20.04■□□□□ 0.8
Scube3Q66PY1 AV356131-201ENSMUST00000206201 750 ntBASIC20.04■□□□□ 0.8
Scube3Q66PY1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.04■□□□□ 0.8
Scube3Q66PY1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.04■□□□□ 0.8
Scube3Q66PY1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scube3Q66PY1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scube3Q66PY1 Notumos-201ENSMUST00000151998 2659 ntBASIC20.04■□□□□ 0.8
Scube3Q66PY1 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.04■□□□□ 0.8
Scube3Q66PY1 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.04■□□□□ 0.8
Scube3Q66PY1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scube3Q66PY1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Scube3Q66PY1 Gm44487-201ENSMUST00000205145 325 ntBASIC20.03■□□□□ 0.8
Scube3Q66PY1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scube3Q66PY1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scube3Q66PY1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Scube3Q66PY1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scube3Q66PY1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Scube3Q66PY1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Scube3Q66PY1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.02■□□□□ 0.8
Scube3Q66PY1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Scube3Q66PY1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scube3Q66PY1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Scube3Q66PY1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scube3Q66PY1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scube3Q66PY1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scube3Q66PY1 Gm13146-201ENSMUST00000118508 780 ntBASIC20.01■□□□□ 0.79
Scube3Q66PY1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scube3Q66PY1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.01■□□□□ 0.79
Scube3Q66PY1 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.01■□□□□ 0.79
Scube3Q66PY1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.01■□□□□ 0.79
Scube3Q66PY1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Scube3Q66PY1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scube3Q66PY1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms