Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.36■□□□□ 0.85
Shroom1Q5SX79 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shroom1Q5SX79 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Shroom1Q5SX79 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.36■□□□□ 0.85
Shroom1Q5SX79 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.36■□□□□ 0.85
Shroom1Q5SX79 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shroom1Q5SX79 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shroom1Q5SX79 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shroom1Q5SX79 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.36■□□□□ 0.85
Shroom1Q5SX79 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Shroom1Q5SX79 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom1Q5SX79 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom1Q5SX79 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom1Q5SX79 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom1Q5SX79 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom1Q5SX79 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.35■□□□□ 0.85
Shroom1Q5SX79 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom1Q5SX79 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.35■□□□□ 0.85
Shroom1Q5SX79 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom1Q5SX79 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.35■□□□□ 0.85
Shroom1Q5SX79 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shroom1Q5SX79 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.35■□□□□ 0.85
Shroom1Q5SX79 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom1Q5SX79 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom1Q5SX79 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom1Q5SX79 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Shroom1Q5SX79 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Shroom1Q5SX79 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom1Q5SX79 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom1Q5SX79 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Shroom1Q5SX79 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.34■□□□□ 0.85
Shroom1Q5SX79 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom1Q5SX79 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Shroom1Q5SX79 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom1Q5SX79 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom1Q5SX79 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shroom1Q5SX79 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Shroom1Q5SX79 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.33■□□□□ 0.85
Shroom1Q5SX79 Mir5133-201ENSMUST00000174955 77 ntBASIC20.33■□□□□ 0.85
Shroom1Q5SX79 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Shroom1Q5SX79 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shroom1Q5SX79 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shroom1Q5SX79 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shroom1Q5SX79 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Shroom1Q5SX79 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shroom1Q5SX79 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom1Q5SX79 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom1Q5SX79 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom1Q5SX79 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom1Q5SX79 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom1Q5SX79 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom1Q5SX79 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom1Q5SX79 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom1Q5SX79 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Shroom1Q5SX79 AA386476-201ENSMUST00000098781 1665 ntBASIC20.32■□□□□ 0.84
Shroom1Q5SX79 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Shroom1Q5SX79 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shroom1Q5SX79 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shroom1Q5SX79 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Shroom1Q5SX79 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Shroom1Q5SX79 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Shroom1Q5SX79 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shroom1Q5SX79 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shroom1Q5SX79 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Shroom1Q5SX79 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shroom1Q5SX79 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.3■□□□□ 0.84
Shroom1Q5SX79 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Shroom1Q5SX79 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shroom1Q5SX79 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.3■□□□□ 0.84
Shroom1Q5SX79 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.3■□□□□ 0.84
Shroom1Q5SX79 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.3■□□□□ 0.84
Shroom1Q5SX79 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.3■□□□□ 0.84
Shroom1Q5SX79 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shroom1Q5SX79 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom1Q5SX79 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom1Q5SX79 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.29■□□□□ 0.84
Shroom1Q5SX79 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Shroom1Q5SX79 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom1Q5SX79 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom1Q5SX79 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom1Q5SX79 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom1Q5SX79 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Shroom1Q5SX79 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shroom1Q5SX79 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shroom1Q5SX79 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shroom1Q5SX79 Gm12441-201ENSMUST00000121806 588 ntBASIC20.28■□□□□ 0.84
Shroom1Q5SX79 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shroom1Q5SX79 Gm38205-201ENSMUST00000192243 258 ntBASIC20.28■□□□□ 0.84
Shroom1Q5SX79 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shroom1Q5SX79 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Shroom1Q5SX79 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Shroom1Q5SX79 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Shroom1Q5SX79 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shroom1Q5SX79 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Shroom1Q5SX79 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Shroom1Q5SX79 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms