Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VMA21Q3ZAQ7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.43■□□□□ 0.38
VMA21Q3ZAQ7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.42■□□□□ 0.38
VMA21Q3ZAQ7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 AC131281.2-201ENST00000520478 145 ntBASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 AC079089.2-201ENST00000531211 1277 ntBASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 MIR4466-201ENST00000606121 54 ntBASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VMA21Q3ZAQ7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 SERBP1P1-201ENST00000396021 1160 ntBASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.4■□□□□ 0.38
VMA21Q3ZAQ7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.39■□□□□ 0.38
VMA21Q3ZAQ7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VMA21Q3ZAQ7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VMA21Q3ZAQ7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VMA21Q3ZAQ7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.39■□□□□ 0.37
VMA21Q3ZAQ7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VMA21Q3ZAQ7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VMA21Q3ZAQ7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.39■□□□□ 0.37
VMA21Q3ZAQ7 AC011298.3-201ENST00000615796 283 ntBASIC17.39■□□□□ 0.37
VMA21Q3ZAQ7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.39■□□□□ 0.37
VMA21Q3ZAQ7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VMA21Q3ZAQ7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms