Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1aP97445 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1aP97445 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1aP97445 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1aP97445 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1aP97445 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1aP97445 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cacna1aP97445 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1aP97445 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.68■□□□□ 0.42
Cacna1aP97445 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cacna1aP97445 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cacna1aP97445 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cacna1aP97445 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1aP97445 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cacna1aP97445 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1aP97445 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.67■□□□□ 0.42
Cacna1aP97445 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1aP97445 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cacna1aP97445 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1aP97445 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1aP97445 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cacna1aP97445 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1aP97445 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1aP97445 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1aP97445 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cacna1aP97445 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1aP97445 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.67■□□□□ 0.42
Cacna1aP97445 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1aP97445 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Cacna1aP97445 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1aP97445 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.67■□□□□ 0.42
Cacna1aP97445 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.67■□□□□ 0.42
Cacna1aP97445 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cacna1aP97445 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.66■□□□□ 0.42
Cacna1aP97445 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1aP97445 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1aP97445 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
Cacna1aP97445 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1aP97445 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1aP97445 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1aP97445 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cacna1aP97445 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1aP97445 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1aP97445 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1aP97445 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1aP97445 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1aP97445 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Cacna1aP97445 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1aP97445 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cacna1aP97445 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cacna1aP97445 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.65■□□□□ 0.42
Cacna1aP97445 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cacna1aP97445 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1aP97445 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1aP97445 Gm7367-201ENSMUST00000057611 492 ntBASIC17.65■□□□□ 0.42
Cacna1aP97445 Gm9987-201ENSMUST00000069768 567 ntBASIC17.65■□□□□ 0.42
Cacna1aP97445 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cacna1aP97445 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cacna1aP97445 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.64■□□□□ 0.41
Cacna1aP97445 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.64■□□□□ 0.41
Cacna1aP97445 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1aP97445 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1aP97445 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1aP97445 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1aP97445 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1aP97445 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1aP97445 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1aP97445 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1aP97445 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cacna1aP97445 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cacna1aP97445 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Cacna1aP97445 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1aP97445 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.63■□□□□ 0.41
Cacna1aP97445 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1aP97445 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cacna1aP97445 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.63■□□□□ 0.41
Cacna1aP97445 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1aP97445 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1aP97445 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1aP97445 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1aP97445 AA386476-201ENSMUST00000098781 1665 ntBASIC17.62■□□□□ 0.41
Cacna1aP97445 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.62■□□□□ 0.41
Cacna1aP97445 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cacna1aP97445 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1aP97445 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1aP97445 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1aP97445 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1aP97445 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Cacna1aP97445 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1aP97445 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1aP97445 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1aP97445 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cacna1aP97445 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1aP97445 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1aP97445 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cacna1aP97445 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.61■□□□□ 0.41
Cacna1aP97445 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.61■□□□□ 0.41
Cacna1aP97445 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.61■□□□□ 0.41
Cacna1aP97445 Gm18101-201ENSMUST00000215769 548 ntBASIC17.61■□□□□ 0.41
Cacna1aP97445 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms