Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1A1P48729 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CSNK1A1P48729 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1A1P48729 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1A1P48729 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1A1P48729 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1A1P48729 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CSNK1A1P48729 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1A1P48729 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1A1P48729 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1A1P48729 AL355001.2-201ENST00000620617 1191 ntBASIC19.22■□□□□ 0.67
CSNK1A1P48729 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1A1P48729 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1A1P48729 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1A1P48729 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.22■□□□□ 0.67
CSNK1A1P48729 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSNK1A1P48729 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1A1P48729 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.21■□□□□ 0.67
CSNK1A1P48729 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1A1P48729 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1A1P48729 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1A1P48729 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1A1P48729 AC099791.1-201ENST00000416440 715 ntBASIC19.21■□□□□ 0.67
CSNK1A1P48729 AP001330.3-201ENST00000520123 633 ntBASIC19.21■□□□□ 0.67
CSNK1A1P48729 OR7E47P-201ENST00000546390 1422 ntBASIC19.21■□□□□ 0.67
CSNK1A1P48729 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSNK1A1P48729 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.21■□□□□ 0.67
CSNK1A1P48729 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.21■□□□□ 0.67
CSNK1A1P48729 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.2■□□□□ 0.66
CSNK1A1P48729 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.2■□□□□ 0.66
CSNK1A1P48729 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1A1P48729 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1A1P48729 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1A1P48729 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1A1P48729 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.2■□□□□ 0.66
CSNK1A1P48729 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.2■□□□□ 0.66
CSNK1A1P48729 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.2■□□□□ 0.66
CSNK1A1P48729 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.2■□□□□ 0.66
CSNK1A1P48729 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1A1P48729 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CSNK1A1P48729 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSNK1A1P48729 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CSNK1A1P48729 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK1A1P48729 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK1A1P48729 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.19■□□□□ 0.66
CSNK1A1P48729 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK1A1P48729 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK1A1P48729 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK1A1P48729 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CSNK1A1P48729 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.19■□□□□ 0.66
CSNK1A1P48729 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CSNK1A1P48729 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.19■□□□□ 0.66
CSNK1A1P48729 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.19■□□□□ 0.66
CSNK1A1P48729 AF213884.3-201ENST00000563833 479 ntBASIC19.19■□□□□ 0.66
CSNK1A1P48729 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.19■□□□□ 0.66
CSNK1A1P48729 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK1A1P48729 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK1A1P48729 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CSNK1A1P48729 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK1A1P48729 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK1A1P48729 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK1A1P48729 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK1A1P48729 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSNK1A1P48729 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSNK1A1P48729 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSNK1A1P48729 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CSNK1A1P48729 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.18■□□□□ 0.66
CSNK1A1P48729 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.18■□□□□ 0.66
CSNK1A1P48729 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CSNK1A1P48729 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CSNK1A1P48729 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSNK1A1P48729 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.18■□□□□ 0.66
CSNK1A1P48729 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.18■□□□□ 0.66
CSNK1A1P48729 AC133561.4-201ENST00000566112 224 ntBASIC19.18■□□□□ 0.66
CSNK1A1P48729 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.18■□□□□ 0.66
CSNK1A1P48729 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSNK1A1P48729 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.18■□□□□ 0.66
CSNK1A1P48729 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSNK1A1P48729 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.18■□□□□ 0.66
CSNK1A1P48729 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSNK1A1P48729 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CSNK1A1P48729 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.17■□□□□ 0.66
CSNK1A1P48729 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CSNK1A1P48729 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK1A1P48729 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK1A1P48729 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CSNK1A1P48729 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK1A1P48729 IGHV3-19-201ENST00000521488 291 ntBASIC19.17■□□□□ 0.66
CSNK1A1P48729 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.17■□□□□ 0.66
CSNK1A1P48729 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CSNK1A1P48729 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
CSNK1A1P48729 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.17■□□□□ 0.66
CSNK1A1P48729 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK1A1P48729 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSNK1A1P48729 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1A1P48729 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1A1P48729 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1A1P48729 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.16■□□□□ 0.66
CSNK1A1P48729 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSNK1A1P48729 MIR939-201ENST00000401314 82 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms