Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd27P41272 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cd27P41272 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cd27P41272 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cd27P41272 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cd27P41272 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.34■□□□□ 0.05
Cd27P41272 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.34■□□□□ 0.05
Cd27P41272 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Cd27P41272 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.34■□□□□ 0.05
Cd27P41272 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.34■□□□□ 0.05
Cd27P41272 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.34■□□□□ 0.05
Cd27P41272 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
Cd27P41272 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cd27P41272 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cd27P41272 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.33■□□□□ 0.05
Cd27P41272 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.33■□□□□ 0.05
Cd27P41272 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cd27P41272 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Cd27P41272 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.33■□□□□ 0.04
Cd27P41272 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cd27P41272 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cd27P41272 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd27P41272 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cd27P41272 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd27P41272 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Cd27P41272 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.33■□□□□ 0.04
Cd27P41272 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd27P41272 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd27P41272 Gm9988-201ENSMUST00000069786 435 ntBASIC15.33■□□□□ 0.04
Cd27P41272 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Cd27P41272 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd27P41272 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.33■□□□□ 0.04
Cd27P41272 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd27P41272 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd27P41272 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cd27P41272 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.32■□□□□ 0.04
Cd27P41272 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Cd27P41272 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd27P41272 Gm18284-201ENSMUST00000172604 624 ntBASIC15.32■□□□□ 0.04
Cd27P41272 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.32■□□□□ 0.04
Cd27P41272 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.32■□□□□ 0.04
Cd27P41272 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.32■□□□□ 0.04
Cd27P41272 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cd27P41272 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd27P41272 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd27P41272 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd27P41272 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd27P41272 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cd27P41272 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.31■□□□□ 0.04
Cd27P41272 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.31■□□□□ 0.04
Cd27P41272 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.31■□□□□ 0.04
Cd27P41272 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cd27P41272 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd27P41272 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cd27P41272 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd27P41272 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Cd27P41272 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd27P41272 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd27P41272 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd27P41272 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd27P41272 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cd27P41272 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd27P41272 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd27P41272 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd27P41272 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cd27P41272 Gm5874-201ENSMUST00000096101 508 ntBASIC15.3■□□□□ 0.04
Cd27P41272 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Cd27P41272 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cd27P41272 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cd27P41272 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd27P41272 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd27P41272 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cd27P41272 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.29■□□□□ 0.04
Cd27P41272 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms