Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 RTT109YLL002W 1311 nt4.69□□□□□ -1.66
SSM4P40318 YMR317WYMR317W 3423 nt4.69□□□□□ -1.66
SSM4P40318 NUP133YKR082W 3474 nt4.69□□□□□ -1.66
SSM4P40318 STV1YMR054W 2673 nt4.69□□□□□ -1.66
SSM4P40318 HPR1YDR138W 2259 nt4.69□□□□□ -1.66
SSM4P40318 PHO13YDL236W 939 nt4.69□□□□□ -1.66
SSM4P40318 YER138W-AYER138W-A 105 nt4.69□□□□□ -1.66
SSM4P40318 ARI1YGL157W 1044 nt4.69□□□□□ -1.66
SSM4P40318 COS12YGL263W 1143 nt4.69□□□□□ -1.66
SSM4P40318 SIC1YLR079W 855 nt4.69□□□□□ -1.66
SSM4P40318 YBL107W-AYBL107W-A 105 nt4.69□□□□□ -1.66
SSM4P40318 YOR314WYOR314W 330 nt4.69□□□□□ -1.66
SSM4P40318 YPR142CYPR142C 564 nt4.69□□□□□ -1.66
SSM4P40318 SPB4YFL002C 1821 nt4.69□□□□□ -1.66
SSM4P40318 YRB30YGL164C 1323 nt4.69□□□□□ -1.66
SSM4P40318 STU2YLR045C 2667 nt4.68□□□□□ -1.66
SSM4P40318 PKH1YDR490C 2301 nt4.68□□□□□ -1.66
SSM4P40318 PUT2YHR037W 1728 nt4.68□□□□□ -1.66
SSM4P40318 GLN4YOR168W 2430 nt4.68□□□□□ -1.66
SSM4P40318 YCR015CYCR015C 954 nt4.68□□□□□ -1.66
SSM4P40318 RNH202YDR279W 1053 nt4.68□□□□□ -1.66
SSM4P40318 CDC26YFR036W 375 nt4.68□□□□□ -1.66
SSM4P40318 tQ(UUG)BtQ(UUG)B 72 nt4.68□□□□□ -1.66
SSM4P40318 BCD1YHR040W 1101 nt4.68□□□□□ -1.66
SSM4P40318 MTG1YMR097C 1104 nt4.68□□□□□ -1.66
SSM4P40318 MRPS8YMR158W 468 nt4.68□□□□□ -1.66
SSM4P40318 CTK1YKL139W 1587 nt4.67□□□□□ -1.66
SSM4P40318 YOL019WYOL019W 1656 nt4.67□□□□□ -1.66
SSM4P40318 TEL1YBL088C 8364 nt4.67□□□□□ -1.66
SSM4P40318 SRS2YJL092W 3525 nt4.67□□□□□ -1.66
SSM4P40318 YCL075WYCL075W 441 nt4.67□□□□□ -1.66
SSM4P40318 YUH1YJR099W 711 nt4.67□□□□□ -1.66
SSM4P40318 MRPS17YMR188C 714 nt4.67□□□□□ -1.66
SSM4P40318 IBD2YNL164C 1056 nt4.67□□□□□ -1.66
SSM4P40318 TFB6YOR352W 1032 nt4.67□□□□□ -1.66
SSM4P40318 snR37snR37 386 nt4.67□□□□□ -1.66
SSM4P40318 DRS2YAL026C 4068 nt4.67□□□□□ -1.66
SSM4P40318 TAF12YDR145W 1620 nt4.67□□□□□ -1.66
SSM4P40318 MNT4YNR059W 1743 nt4.67□□□□□ -1.66
SSM4P40318 UBP10YNL186W 2379 nt4.66□□□□□ -1.66
SSM4P40318 SYF1YDR416W 2580 nt4.66□□□□□ -1.66
SSM4P40318 RAD54YGL163C 2697 nt4.66□□□□□ -1.66
SSM4P40318 MDM1YML104C 3384 nt4.66□□□□□ -1.66
SSM4P40318 ARG5,6YER069W 2592 nt4.66□□□□□ -1.66
SSM4P40318 SSB1YDL229W 1842 nt4.66□□□□□ -1.66
SSM4P40318 SMP3YOR149C 1551 nt4.66□□□□□ -1.66
SSM4P40318 HTA2YBL003C 399 nt4.66□□□□□ -1.66
SSM4P40318 YMR085WYMR085W 1299 nt4.66□□□□□ -1.66
SSM4P40318 RPN8YOR261C 1017 nt4.66□□□□□ -1.66
SSM4P40318 MUM2YBR057C 1101 nt4.66□□□□□ -1.66
SSM4P40318 SUT2YPR009W 807 nt4.66□□□□□ -1.66
SSM4P40318 YBR255C-AYBR255C-A 363 nt4.66□□□□□ -1.66
SSM4P40318 VTC4YJL012C 2166 nt4.65□□□□□ -1.66
SSM4P40318 GLO3YER122C 1482 nt4.65□□□□□ -1.67
SSM4P40318 PCI8YIL071C 1335 nt4.65□□□□□ -1.67
SSM4P40318 SUP45YBR143C 1314 nt4.65□□□□□ -1.67
SSM4P40318 YDL176WYDL176W 2127 nt4.65□□□□□ -1.67
SSM4P40318 SHU2YDR078C 672 nt4.65□□□□□ -1.67
SSM4P40318 MRPL16YBL038W 699 nt4.65□□□□□ -1.67
SSM4P40318 SAT4YCR008W 1812 nt4.65□□□□□ -1.67
SSM4P40318 COS8YHL048W 1146 nt4.64□□□□□ -1.67
SSM4P40318 COX23YHR116W 456 nt4.64□□□□□ -1.67
SSM4P40318 CUZ1YNL155W 825 nt4.64□□□□□ -1.67
SSM4P40318 ATG19YOL082W 1248 nt4.64□□□□□ -1.67
SSM4P40318 POC4YPL144W 447 nt4.64□□□□□ -1.67
SSM4P40318 ATG29YPL166W 642 nt4.64□□□□□ -1.67
SSM4P40318 YPL168WYPL168W 1293 nt4.64□□□□□ -1.67
SSM4P40318 SPS2YDR522C 1509 nt4.63□□□□□ -1.67
SSM4P40318 OPT2YPR194C 2634 nt4.63□□□□□ -1.67
SSM4P40318 YCR016WYCR016W 873 nt4.63□□□□□ -1.67
SSM4P40318 tK(UUU)DtK(UUU)D 73 nt4.63□□□□□ -1.67
SSM4P40318 tK(UUU)G1tK(UUU)G1 73 nt4.63□□□□□ -1.67
SSM4P40318 tK(UUU)G2tK(UUU)G2 73 nt4.63□□□□□ -1.67
SSM4P40318 tK(UUU)KtK(UUU)K 73 nt4.63□□□□□ -1.67
SSM4P40318 tK(UUU)LtK(UUU)L 73 nt4.63□□□□□ -1.67
SSM4P40318 tK(UUU)OtK(UUU)O 73 nt4.63□□□□□ -1.67
SSM4P40318 tK(UUU)PtK(UUU)P 73 nt4.63□□□□□ -1.67
SSM4P40318 RPS21AYKR057W 264 nt4.63□□□□□ -1.67
SSM4P40318 YLR042CYLR042C 486 nt4.63□□□□□ -1.67
SSM4P40318 MAP1YLR244C 1164 nt4.63□□□□□ -1.67
SSM4P40318 YML090WYML090W 387 nt4.63□□□□□ -1.67
SSM4P40318 YOR338WYOR338W 1092 nt4.63□□□□□ -1.67
SSM4P40318 TAF14YPL129W 735 nt4.63□□□□□ -1.67
SSM4P40318 PET20YPL159C 762 nt4.63□□□□□ -1.67
SSM4P40318 OM14YBR230C 405 nt4.63□□□□□ -1.67
SSM4P40318 REC8YPR007C 2043 nt4.62□□□□□ -1.67
SSM4P40318 BMS1YPL217C 3552 nt4.62□□□□□ -1.67
SSM4P40318 CTR86YCR054C 1692 nt4.62□□□□□ -1.67
SSM4P40318 PTM1YKL039W 1572 nt4.62□□□□□ -1.67
SSM4P40318 YCR007CYCR007C 720 nt4.62□□□□□ -1.67
SSM4P40318 YGR168CYGR168C 1131 nt4.62□□□□□ -1.67
SSM4P40318 DCG1YIR030C 735 nt4.62□□□□□ -1.67
SSM4P40318 YLR311CYLR311C 348 nt4.62□□□□□ -1.67
SSM4P40318 YOL038C-AYOL038C-A 96 nt4.62□□□□□ -1.67
SSM4P40318 RFM1YOR279C 933 nt4.62□□□□□ -1.67
SSM4P40318 FLO5YHR211W 3228 nt4.62□□□□□ -1.67
SSM4P40318 ABP140YOR239W 1887 nt4.61□□□□□ -1.67
SSM4P40318 DNM1YLL001W 2274 nt4.61□□□□□ -1.67
SSM4P40318 FMP33YJL161W 543 nt4.61□□□□□ -1.67
SSM4P40318 ATG16YMR159C 453 nt4.61□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 44.3 ms