Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.15■■□□□ 1.46
TPM3P06753 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.15■■□□□ 1.46
TPM3P06753 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TPM3P06753 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TPM3P06753 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
TPM3P06753 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC24.14■■□□□ 1.46
TPM3P06753 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
TPM3P06753 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.14■■□□□ 1.46
TPM3P06753 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
TPM3P06753 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TPM3P06753 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TPM3P06753 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TPM3P06753 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.14■■□□□ 1.45
TPM3P06753 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TPM3P06753 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.14■■□□□ 1.45
TPM3P06753 ATP5G2P3-201ENST00000429083 425 ntBASIC24.14■■□□□ 1.45
TPM3P06753 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TPM3P06753 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.14■■□□□ 1.45
TPM3P06753 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.14■■□□□ 1.45
TPM3P06753 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TPM3P06753 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
TPM3P06753 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TPM3P06753 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.14■■□□□ 1.45
TPM3P06753 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
TPM3P06753 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.45
TPM3P06753 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
TPM3P06753 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
TPM3P06753 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TPM3P06753 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
TPM3P06753 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TPM3P06753 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC24.13■■□□□ 1.45
TPM3P06753 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TPM3P06753 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TPM3P06753 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TPM3P06753 AC010980.1-201ENST00000587192 1142 ntBASIC24.13■■□□□ 1.45
TPM3P06753 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.13■■□□□ 1.45
TPM3P06753 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TPM3P06753 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
TPM3P06753 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TPM3P06753 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.12■■□□□ 1.45
TPM3P06753 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
TPM3P06753 AC005703.6-201ENST00000623265 1329 ntBASIC24.12■■□□□ 1.45
TPM3P06753 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TPM3P06753 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
TPM3P06753 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
TPM3P06753 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TPM3P06753 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.12■■□□□ 1.45
TPM3P06753 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
TPM3P06753 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
TPM3P06753 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TPM3P06753 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TPM3P06753 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TPM3P06753 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
TPM3P06753 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
TPM3P06753 AC004987.1-201ENST00000428627 508 ntBASIC24.11■■□□□ 1.45
TPM3P06753 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
TPM3P06753 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.11■■□□□ 1.45
TPM3P06753 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TPM3P06753 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TPM3P06753 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TPM3P06753 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.11■■□□□ 1.45
TPM3P06753 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.1■■□□□ 1.45
TPM3P06753 AL157384.1-201ENST00000445995 2473 ntBASIC24.1■■□□□ 1.45
TPM3P06753 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TPM3P06753 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
TPM3P06753 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TPM3P06753 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.1■■□□□ 1.45
TPM3P06753 MIR4508-201ENST00000584178 70 ntBASIC24.1■■□□□ 1.45
TPM3P06753 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TPM3P06753 Z98882.1-201ENST00000622160 2253 ntBASIC24.1■■□□□ 1.45
TPM3P06753 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TPM3P06753 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TPM3P06753 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TPM3P06753 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
TPM3P06753 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TPM3P06753 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TPM3P06753 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TPM3P06753 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.09■■□□□ 1.45
TPM3P06753 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.09■■□□□ 1.45
TPM3P06753 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TPM3P06753 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.09■■□□□ 1.45
TPM3P06753 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TPM3P06753 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
TPM3P06753 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TPM3P06753 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC24.08■■□□□ 1.45
TPM3P06753 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
TPM3P06753 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.08■■□□□ 1.45
TPM3P06753 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.08■■□□□ 1.45
TPM3P06753 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
TPM3P06753 FEM1AP4-201ENST00000443167 1987 ntBASIC24.08■■□□□ 1.45
TPM3P06753 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TPM3P06753 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
TPM3P06753 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC24.08■■□□□ 1.45
TPM3P06753 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC24.08■■□□□ 1.45
TPM3P06753 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
TPM3P06753 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
TPM3P06753 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TPM3P06753 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
TPM3P06753 DUX4L4-201ENST00000566884 1269 ntBASIC24.07■■□□□ 1.44
TPM3P06753 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms