Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1BO75841 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1BO75841 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
UPK1BO75841 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1BO75841 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1BO75841 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
UPK1BO75841 AL157400.5-201ENST00000507624 621 ntBASIC18.87■□□□□ 0.61
UPK1BO75841 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.87■□□□□ 0.61
UPK1BO75841 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.87■□□□□ 0.61
UPK1BO75841 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.87■□□□□ 0.61
UPK1BO75841 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1BO75841 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1BO75841 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
UPK1BO75841 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
UPK1BO75841 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
UPK1BO75841 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1BO75841 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1BO75841 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1BO75841 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1BO75841 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.86■□□□□ 0.61
UPK1BO75841 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.86■□□□□ 0.61
UPK1BO75841 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.86■□□□□ 0.61
UPK1BO75841 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.86■□□□□ 0.61
UPK1BO75841 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UPK1BO75841 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
UPK1BO75841 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1BO75841 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1BO75841 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1BO75841 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1BO75841 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.85■□□□□ 0.61
UPK1BO75841 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1BO75841 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1BO75841 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1BO75841 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1BO75841 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.85■□□□□ 0.61
UPK1BO75841 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1BO75841 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.85■□□□□ 0.61
UPK1BO75841 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UPK1BO75841 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1BO75841 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.85■□□□□ 0.61
UPK1BO75841 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1BO75841 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1BO75841 AC131274.2-201ENST00000580697 1507 ntBASIC18.84■□□□□ 0.61
UPK1BO75841 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
UPK1BO75841 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1BO75841 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UPK1BO75841 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1BO75841 LINC01971-201ENST00000617888 1048 ntBASIC18.84■□□□□ 0.61
UPK1BO75841 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1BO75841 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1BO75841 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
UPK1BO75841 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1BO75841 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1BO75841 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
UPK1BO75841 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1BO75841 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UPK1BO75841 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.61
UPK1BO75841 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.83■□□□□ 0.61
UPK1BO75841 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPK1BO75841 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPK1BO75841 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK1BO75841 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
UPK1BO75841 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK1BO75841 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK1BO75841 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK1BO75841 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPK1BO75841 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UPK1BO75841 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
UPK1BO75841 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
UPK1BO75841 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.82■□□□□ 0.6
UPK1BO75841 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
UPK1BO75841 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1BO75841 PCDHAC2-203ENST00000615316 3011 ntBASIC18.82■□□□□ 0.6
UPK1BO75841 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UPK1BO75841 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1BO75841 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
UPK1BO75841 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1BO75841 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1BO75841 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.82■□□□□ 0.6
UPK1BO75841 AC044849.2-201ENST00000606596 710 ntBASIC18.82■□□□□ 0.6
UPK1BO75841 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1BO75841 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.82■□□□□ 0.6
UPK1BO75841 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.82■□□□□ 0.6
UPK1BO75841 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1BO75841 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPK1BO75841 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms