Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
BckdkO55028 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
BckdkO55028 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BckdkO55028 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BckdkO55028 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
BckdkO55028 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
BckdkO55028 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
BckdkO55028 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.68■□□□□ 0.42
BckdkO55028 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.68■□□□□ 0.42
BckdkO55028 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.68■□□□□ 0.42
BckdkO55028 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
BckdkO55028 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
BckdkO55028 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
BckdkO55028 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BckdkO55028 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BckdkO55028 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BckdkO55028 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.67■□□□□ 0.42
BckdkO55028 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BckdkO55028 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
BckdkO55028 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.66■□□□□ 0.42
BckdkO55028 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BckdkO55028 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BckdkO55028 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.66■□□□□ 0.42
BckdkO55028 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.66■□□□□ 0.42
BckdkO55028 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BckdkO55028 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BckdkO55028 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BckdkO55028 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BckdkO55028 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.66■□□□□ 0.42
BckdkO55028 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BckdkO55028 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BckdkO55028 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
BckdkO55028 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BckdkO55028 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BckdkO55028 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.65■□□□□ 0.42
BckdkO55028 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BckdkO55028 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BckdkO55028 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BckdkO55028 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BckdkO55028 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.65■□□□□ 0.42
BckdkO55028 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BckdkO55028 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BckdkO55028 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BckdkO55028 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
BckdkO55028 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BckdkO55028 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BckdkO55028 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.64■□□□□ 0.42
BckdkO55028 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
BckdkO55028 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.64■□□□□ 0.41
BckdkO55028 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
BckdkO55028 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.64■□□□□ 0.41
BckdkO55028 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 Gm42642-201ENSMUST00000200683 355 ntBASIC17.64■□□□□ 0.41
BckdkO55028 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BckdkO55028 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.64■□□□□ 0.41
BckdkO55028 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BckdkO55028 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
BckdkO55028 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BckdkO55028 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BckdkO55028 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BckdkO55028 Gm42569-201ENSMUST00000200539 472 ntBASIC17.63■□□□□ 0.41
BckdkO55028 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BckdkO55028 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BckdkO55028 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BckdkO55028 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BckdkO55028 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
BckdkO55028 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BckdkO55028 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BckdkO55028 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
BckdkO55028 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.62■□□□□ 0.41
BckdkO55028 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BckdkO55028 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BckdkO55028 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BckdkO55028 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BckdkO55028 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
BckdkO55028 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BckdkO55028 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BckdkO55028 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BckdkO55028 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
BckdkO55028 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.62■□□□□ 0.41
BckdkO55028 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BckdkO55028 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BckdkO55028 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BckdkO55028 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.61■□□□□ 0.41
BckdkO55028 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.61■□□□□ 0.41
BckdkO55028 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BckdkO55028 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
BckdkO55028 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 157.5 ms