Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Shisa8J3QNX5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa8J3QNX5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Shisa8J3QNX5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shisa8J3QNX5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shisa8J3QNX5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa8J3QNX5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa8J3QNX5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa8J3QNX5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa8J3QNX5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Shisa8J3QNX5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa8J3QNX5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.41■□□□□ 0.38
Shisa8J3QNX5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.41■□□□□ 0.38
Shisa8J3QNX5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa8J3QNX5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shisa8J3QNX5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.41■□□□□ 0.38
Shisa8J3QNX5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.4■□□□□ 0.38
Shisa8J3QNX5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Shisa8J3QNX5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.39■□□□□ 0.37
Shisa8J3QNX5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Shisa8J3QNX5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa8J3QNX5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa8J3QNX5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa8J3QNX5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa8J3QNX5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa8J3QNX5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa8J3QNX5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.39■□□□□ 0.37
Shisa8J3QNX5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa8J3QNX5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shisa8J3QNX5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa8J3QNX5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa8J3QNX5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Shisa8J3QNX5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Shisa8J3QNX5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Shisa8J3QNX5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa8J3QNX5 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.38■□□□□ 0.37
Shisa8J3QNX5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa8J3QNX5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa8J3QNX5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa8J3QNX5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shisa8J3QNX5 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.38■□□□□ 0.37
Shisa8J3QNX5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.38■□□□□ 0.37
Shisa8J3QNX5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.37■□□□□ 0.37
Shisa8J3QNX5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shisa8J3QNX5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shisa8J3QNX5 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms