Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11236J3QMS7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11236J3QMS7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11236J3QMS7 Gm37856-201ENSMUST00000191634 999 ntBASIC20.14■□□□□ 0.81
Gm11236J3QMS7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11236J3QMS7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11236J3QMS7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm11236J3QMS7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm11236J3QMS7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm11236J3QMS7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm11236J3QMS7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm11236J3QMS7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Gm11236J3QMS7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm11236J3QMS7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm11236J3QMS7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Gm11236J3QMS7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Gm11236J3QMS7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm11236J3QMS7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm11236J3QMS7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Gm11236J3QMS7 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.12■□□□□ 0.81
Gm11236J3QMS7 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.12■□□□□ 0.81
Gm11236J3QMS7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm11236J3QMS7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm11236J3QMS7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Gm11236J3QMS7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm11236J3QMS7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm11236J3QMS7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm11236J3QMS7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Gm11236J3QMS7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm11236J3QMS7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Gm11236J3QMS7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Gm11236J3QMS7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.11■□□□□ 0.81
Gm11236J3QMS7 Gm13168-201ENSMUST00000121771 632 ntBASIC20.11■□□□□ 0.81
Gm11236J3QMS7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Gm11236J3QMS7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm11236J3QMS7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm11236J3QMS7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm11236J3QMS7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm11236J3QMS7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.1■□□□□ 0.81
Gm11236J3QMS7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.1■□□□□ 0.81
Gm11236J3QMS7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm11236J3QMS7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm11236J3QMS7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm11236J3QMS7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11236J3QMS7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Gm11236J3QMS7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11236J3QMS7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11236J3QMS7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Gm11236J3QMS7 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.09■□□□□ 0.81
Gm11236J3QMS7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.09■□□□□ 0.81
Gm11236J3QMS7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11236J3QMS7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Gm11236J3QMS7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11236J3QMS7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11236J3QMS7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm11236J3QMS7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm11236J3QMS7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm11236J3QMS7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm11236J3QMS7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm11236J3QMS7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.08■□□□□ 0.81
Gm11236J3QMS7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm11236J3QMS7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm11236J3QMS7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gm11236J3QMS7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.81
Gm11236J3QMS7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gm11236J3QMS7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gm11236J3QMS7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.08■□□□□ 0.81
Gm11236J3QMS7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Gm11236J3QMS7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Trmt13-210ENSMUST00000198454 880 ntBASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Gm11236J3QMS7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Gm11236J3QMS7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm11236J3QMS7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms