Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.58■■□□□ 1.04
TBC1D3FA6NER0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.58■■□□□ 1.04
TBC1D3FA6NER0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
TBC1D3FA6NER0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.57■■□□□ 1.04
TBC1D3FA6NER0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
TBC1D3FA6NER0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3FA6NER0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3FA6NER0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3FA6NER0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3FA6NER0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.57■■□□□ 1.04
TBC1D3FA6NER0 BID-214ENST00000617586 542 ntTSL 5 BASIC21.57■■□□□ 1.04
TBC1D3FA6NER0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3FA6NER0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.57■■□□□ 1.04
TBC1D3FA6NER0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.57■■□□□ 1.04
TBC1D3FA6NER0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3FA6NER0 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TBC1D3FA6NER0 ID1-201ENST00000376105 1233 ntBASIC21.56■■□□□ 1.04
TBC1D3FA6NER0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.56■■□□□ 1.04
TBC1D3FA6NER0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3FA6NER0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3FA6NER0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.56■■□□□ 1.04
TBC1D3FA6NER0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TBC1D3FA6NER0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TBC1D3FA6NER0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 AC073111.5-205ENST00000641717 521 ntBASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TBC1D3FA6NER0 AP004607.7-201ENST00000527152 1677 ntBASIC21.53■■□□□ 1.04
TBC1D3FA6NER0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3FA6NER0 KRT87P-202ENST00000534226 1464 ntBASIC21.53■■□□□ 1.04
TBC1D3FA6NER0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TBC1D3FA6NER0 KRT18P11-201ENST00000435214 1283 ntBASIC21.53■■□□□ 1.04
TBC1D3FA6NER0 CDCA4P2-201ENST00000441182 718 ntBASIC21.53■■□□□ 1.04
TBC1D3FA6NER0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.53■■□□□ 1.04
TBC1D3FA6NER0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TBC1D3FA6NER0 AC104187.1-201ENST00000607510 612 ntBASIC21.53■■□□□ 1.04
TBC1D3FA6NER0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.53■■□□□ 1.04
TBC1D3FA6NER0 OR7E47P-201ENST00000546390 1422 ntBASIC21.53■■□□□ 1.04
TBC1D3FA6NER0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.53■■□□□ 1.04
TBC1D3FA6NER0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3FA6NER0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3FA6NER0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3FA6NER0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3FA6NER0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3FA6NER0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TBC1D3FA6NER0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3FA6NER0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TBC1D3FA6NER0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.52■■□□□ 1.04
TBC1D3FA6NER0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.52■■□□□ 1.04
TBC1D3FA6NER0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.52■■□□□ 1.04
TBC1D3FA6NER0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.52■■□□□ 1.04
TBC1D3FA6NER0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.52■■□□□ 1.04
TBC1D3FA6NER0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TBC1D3FA6NER0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.51■■□□□ 1.03
TBC1D3FA6NER0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.51■■□□□ 1.03
TBC1D3FA6NER0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3FA6NER0 DUSP8P5-201ENST00000422884 1815 ntBASIC21.51■■□□□ 1.03
TBC1D3FA6NER0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3FA6NER0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3FA6NER0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.51■■□□□ 1.03
TBC1D3FA6NER0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.51■■□□□ 1.03
TBC1D3FA6NER0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.51■■□□□ 1.03
TBC1D3FA6NER0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.51■■□□□ 1.03
TBC1D3FA6NER0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
TBC1D3FA6NER0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TBC1D3FA6NER0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.51■■□□□ 1.03
TBC1D3FA6NER0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3FA6NER0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3FA6NER0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TBC1D3FA6NER0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TBC1D3FA6NER0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3FA6NER0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TBC1D3FA6NER0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms