Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.69■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.69■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Igkv5-45A0A0B4J1J1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-45A0A0B4J1J1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.68■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.68■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-45A0A0B4J1J1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-45A0A0B4J1J1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.67■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Gm10602-201ENSMUST00000098239 609 ntBASIC19.66■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.65■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-45A0A0B4J1J1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.65■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Igkv5-45A0A0B4J1J1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gm13148-201ENSMUST00000118892 745 ntBASIC19.64■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gm6365-201ENSMUST00000054711 744 ntBASIC19.64■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv5-45A0A0B4J1J1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Igkv5-45A0A0B4J1J1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Mir5133-201ENSMUST00000174955 77 ntBASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gm7290-201ENSMUST00000104990 617 ntBASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gm12918-201ENSMUST00000120234 636 ntBASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gm15710-201ENSMUST00000121821 636 ntBASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Gm5075-201ENSMUST00000196916 622 ntBASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.62■□□□□ 0.73
Igkv5-45A0A0B4J1J1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms