Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Atp6v1c1Q9Z1G3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.59■■□□□ 1.53
Atp6v1c1Q9Z1G3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Atp6v1c1Q9Z1G3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Atp6v1c1Q9Z1G3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Atp6v1c1Q9Z1G3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Atp6v1c1Q9Z1G3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Atp6v1c1Q9Z1G3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Atp6v1c1Q9Z1G3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.53■■□□□ 1.52
Atp6v1c1Q9Z1G3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Atp6v1c1Q9Z1G3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Atp6v1c1Q9Z1G3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.49■■□□□ 1.51
Atp6v1c1Q9Z1G3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.49■■□□□ 1.51
Atp6v1c1Q9Z1G3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Atp6v1c1Q9Z1G3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Atp6v1c1Q9Z1G3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.47■■□□□ 1.51
Atp6v1c1Q9Z1G3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.47■■□□□ 1.51
Atp6v1c1Q9Z1G3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Atp6v1c1Q9Z1G3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.45■■□□□ 1.51
Atp6v1c1Q9Z1G3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Atp6v1c1Q9Z1G3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Atp6v1c1Q9Z1G3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Atp6v1c1Q9Z1G3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Atp6v1c1Q9Z1G3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Atp6v1c1Q9Z1G3 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.39■■□□□ 1.49
Atp6v1c1Q9Z1G3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Atp6v1c1Q9Z1G3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Atp6v1c1Q9Z1G3 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Atp6v1c1Q9Z1G3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Atp6v1c1Q9Z1G3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Atp6v1c1Q9Z1G3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.38■■□□□ 1.49
Atp6v1c1Q9Z1G3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Atp6v1c1Q9Z1G3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Atp6v1c1Q9Z1G3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Atp6v1c1Q9Z1G3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Atp6v1c1Q9Z1G3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Atp6v1c1Q9Z1G3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Atp6v1c1Q9Z1G3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Atp6v1c1Q9Z1G3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Atp6v1c1Q9Z1G3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Atp6v1c1Q9Z1G3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Atp6v1c1Q9Z1G3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Atp6v1c1Q9Z1G3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Atp6v1c1Q9Z1G3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Atp6v1c1Q9Z1G3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Atp6v1c1Q9Z1G3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Atp6v1c1Q9Z1G3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Atp6v1c1Q9Z1G3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Atp6v1c1Q9Z1G3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Atp6v1c1Q9Z1G3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Atp6v1c1Q9Z1G3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Atp6v1c1Q9Z1G3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Atp6v1c1Q9Z1G3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Atp6v1c1Q9Z1G3 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Atp6v1c1Q9Z1G3 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.24■■□□□ 1.47
Atp6v1c1Q9Z1G3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Atp6v1c1Q9Z1G3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Atp6v1c1Q9Z1G3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Atp6v1c1Q9Z1G3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Atp6v1c1Q9Z1G3 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.23■■□□□ 1.47
Atp6v1c1Q9Z1G3 Gm27322-201ENSMUST00000184007 104 ntBASIC24.22■■□□□ 1.47
Atp6v1c1Q9Z1G3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.21■■□□□ 1.47
Atp6v1c1Q9Z1G3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Atp6v1c1Q9Z1G3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Atp6v1c1Q9Z1G3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
Atp6v1c1Q9Z1G3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Atp6v1c1Q9Z1G3 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Atp6v1c1Q9Z1G3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Atp6v1c1Q9Z1G3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Atp6v1c1Q9Z1G3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Atp6v1c1Q9Z1G3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Atp6v1c1Q9Z1G3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Atp6v1c1Q9Z1G3 Mipep-204ENSMUST00000225043 1548 ntBASIC24.15■■□□□ 1.46
Atp6v1c1Q9Z1G3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Atp6v1c1Q9Z1G3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Atp6v1c1Q9Z1G3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.13■■□□□ 1.45
Atp6v1c1Q9Z1G3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Atp6v1c1Q9Z1G3 Gm26115-201ENSMUST00000175605 87 ntBASIC24.12■■□□□ 1.45
Atp6v1c1Q9Z1G3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.12■■□□□ 1.45
Atp6v1c1Q9Z1G3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Atp6v1c1Q9Z1G3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Atp6v1c1Q9Z1G3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Atp6v1c1Q9Z1G3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.11■■□□□ 1.45
Atp6v1c1Q9Z1G3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Atp6v1c1Q9Z1G3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Atp6v1c1Q9Z1G3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Atp6v1c1Q9Z1G3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Atp6v1c1Q9Z1G3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Atp6v1c1Q9Z1G3 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.05■■□□□ 1.44
Atp6v1c1Q9Z1G3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Atp6v1c1Q9Z1G3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Atp6v1c1Q9Z1G3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Atp6v1c1Q9Z1G3 Gm8109-201ENSMUST00000194076 746 ntBASIC24.02■■□□□ 1.44
Atp6v1c1Q9Z1G3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.02■■□□□ 1.44
Atp6v1c1Q9Z1G3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Atp6v1c1Q9Z1G3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Atp6v1c1Q9Z1G3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Atp6v1c1Q9Z1G3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Atp6v1c1Q9Z1G3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Atp6v1c1Q9Z1G3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 7.7 ms