Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CSNK1G3Q9Y6M4 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CSNK1G3Q9Y6M4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CSNK1G3Q9Y6M4 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CSNK1G3Q9Y6M4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.71■■□□□ 1.87
CSNK1G3Q9Y6M4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CSNK1G3Q9Y6M4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.7■■□□□ 1.86
CSNK1G3Q9Y6M4 ABHD17AP4-201ENST00000411545 909 ntBASIC26.68■■□□□ 1.86
CSNK1G3Q9Y6M4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CSNK1G3Q9Y6M4 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CSNK1G3Q9Y6M4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CSNK1G3Q9Y6M4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CSNK1G3Q9Y6M4 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CSNK1G3Q9Y6M4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CSNK1G3Q9Y6M4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CSNK1G3Q9Y6M4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CSNK1G3Q9Y6M4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
CSNK1G3Q9Y6M4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
CSNK1G3Q9Y6M4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.63■■□□□ 1.85
CSNK1G3Q9Y6M4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.63■■□□□ 1.85
CSNK1G3Q9Y6M4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.62■■□□□ 1.85
CSNK1G3Q9Y6M4 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CSNK1G3Q9Y6M4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CSNK1G3Q9Y6M4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CSNK1G3Q9Y6M4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CSNK1G3Q9Y6M4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
CSNK1G3Q9Y6M4 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
CSNK1G3Q9Y6M4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CSNK1G3Q9Y6M4 MIR7108-201ENST00000614319 87 ntBASIC26.57■■□□□ 1.84
CSNK1G3Q9Y6M4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CSNK1G3Q9Y6M4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.56■■□□□ 1.84
CSNK1G3Q9Y6M4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CSNK1G3Q9Y6M4 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CSNK1G3Q9Y6M4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CSNK1G3Q9Y6M4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CSNK1G3Q9Y6M4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.55■■□□□ 1.84
CSNK1G3Q9Y6M4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.54■■□□□ 1.84
CSNK1G3Q9Y6M4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CSNK1G3Q9Y6M4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.53■■□□□ 1.84
CSNK1G3Q9Y6M4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CSNK1G3Q9Y6M4 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CSNK1G3Q9Y6M4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CSNK1G3Q9Y6M4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CSNK1G3Q9Y6M4 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC26.52■■□□□ 1.84
CSNK1G3Q9Y6M4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.52■■□□□ 1.84
CSNK1G3Q9Y6M4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CSNK1G3Q9Y6M4 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CSNK1G3Q9Y6M4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CSNK1G3Q9Y6M4 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CSNK1G3Q9Y6M4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
CSNK1G3Q9Y6M4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
CSNK1G3Q9Y6M4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.47■■□□□ 1.83
CSNK1G3Q9Y6M4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.47■■□□□ 1.83
CSNK1G3Q9Y6M4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.46■■□□□ 1.83
CSNK1G3Q9Y6M4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.46■■□□□ 1.83
CSNK1G3Q9Y6M4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CSNK1G3Q9Y6M4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.44■■□□□ 1.82
CSNK1G3Q9Y6M4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
CSNK1G3Q9Y6M4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CSNK1G3Q9Y6M4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CSNK1G3Q9Y6M4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CSNK1G3Q9Y6M4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CSNK1G3Q9Y6M4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.4■■□□□ 1.82
CSNK1G3Q9Y6M4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CSNK1G3Q9Y6M4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CSNK1G3Q9Y6M4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CSNK1G3Q9Y6M4 ZNRF2P2-203ENST00000454624 420 ntBASIC26.39■■□□□ 1.82
CSNK1G3Q9Y6M4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.39■■□□□ 1.82
CSNK1G3Q9Y6M4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CSNK1G3Q9Y6M4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.39■■□□□ 1.82
CSNK1G3Q9Y6M4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.38■■□□□ 1.81
CSNK1G3Q9Y6M4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSNK1G3Q9Y6M4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSNK1G3Q9Y6M4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CSNK1G3Q9Y6M4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CSNK1G3Q9Y6M4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.37■■□□□ 1.81
CSNK1G3Q9Y6M4 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CSNK1G3Q9Y6M4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.36■■□□□ 1.81
CSNK1G3Q9Y6M4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CSNK1G3Q9Y6M4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.34■■□□□ 1.81
CSNK1G3Q9Y6M4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.34■■□□□ 1.81
CSNK1G3Q9Y6M4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.34■■□□□ 1.81
CSNK1G3Q9Y6M4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.34■■□□□ 1.81
CSNK1G3Q9Y6M4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CSNK1G3Q9Y6M4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.34■■□□□ 1.81
CSNK1G3Q9Y6M4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CSNK1G3Q9Y6M4 DUX4L29-201ENST00000425409 679 ntBASIC26.33■■□□□ 1.81
CSNK1G3Q9Y6M4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.32■■□□□ 1.8
CSNK1G3Q9Y6M4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.31■■□□□ 1.8
CSNK1G3Q9Y6M4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CSNK1G3Q9Y6M4 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CSNK1G3Q9Y6M4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CSNK1G3Q9Y6M4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.3■■□□□ 1.8
CSNK1G3Q9Y6M4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CSNK1G3Q9Y6M4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CSNK1G3Q9Y6M4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.3■■□□□ 1.8
CSNK1G3Q9Y6M4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CSNK1G3Q9Y6M4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CSNK1G3Q9Y6M4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.3■■□□□ 1.8
CSNK1G3Q9Y6M4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms