Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
CYP46A1Q9Y6A2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CYP46A1Q9Y6A2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CYP46A1Q9Y6A2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC32.3■■■□□ 2.76
CYP46A1Q9Y6A2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CYP46A1Q9Y6A2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.28■■■□□ 2.76
CYP46A1Q9Y6A2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
CYP46A1Q9Y6A2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CYP46A1Q9Y6A2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CYP46A1Q9Y6A2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC32.19■■■□□ 2.74
CYP46A1Q9Y6A2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CYP46A1Q9Y6A2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CYP46A1Q9Y6A2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CYP46A1Q9Y6A2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC32.14■■■□□ 2.74
CYP46A1Q9Y6A2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.14■■■□□ 2.74
CYP46A1Q9Y6A2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CYP46A1Q9Y6A2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.12■■■□□ 2.73
CYP46A1Q9Y6A2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC32.11■■■□□ 2.73
CYP46A1Q9Y6A2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CYP46A1Q9Y6A2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.1■■■□□ 2.73
CYP46A1Q9Y6A2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.1■■■□□ 2.73
CYP46A1Q9Y6A2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CYP46A1Q9Y6A2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC32.09■■■□□ 2.73
CYP46A1Q9Y6A2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
CYP46A1Q9Y6A2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC32.07■■■□□ 2.73
CYP46A1Q9Y6A2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CYP46A1Q9Y6A2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CYP46A1Q9Y6A2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC32.04■■■□□ 2.72
CYP46A1Q9Y6A2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CYP46A1Q9Y6A2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CYP46A1Q9Y6A2 AL161658.1-201ENST00000623641 1967 ntBASIC32.01■■■□□ 2.71
CYP46A1Q9Y6A2 ABCB10P1-201ENST00000614297 2181 ntBASIC32■■■□□ 2.71
CYP46A1Q9Y6A2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32■■■□□ 2.71
CYP46A1Q9Y6A2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
CYP46A1Q9Y6A2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CYP46A1Q9Y6A2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CYP46A1Q9Y6A2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.98■■■□□ 2.71
CYP46A1Q9Y6A2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
CYP46A1Q9Y6A2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CYP46A1Q9Y6A2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.95■■■□□ 2.71
CYP46A1Q9Y6A2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CYP46A1Q9Y6A2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
CYP46A1Q9Y6A2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.94■■■□□ 2.7
CYP46A1Q9Y6A2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.94■■■□□ 2.7
CYP46A1Q9Y6A2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CYP46A1Q9Y6A2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CYP46A1Q9Y6A2 AL133380.1-201ENST00000506013 324 ntBASIC31.93■■■□□ 2.7
CYP46A1Q9Y6A2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CYP46A1Q9Y6A2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.92■■■□□ 2.7
CYP46A1Q9Y6A2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CYP46A1Q9Y6A2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CYP46A1Q9Y6A2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
CYP46A1Q9Y6A2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
CYP46A1Q9Y6A2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CYP46A1Q9Y6A2 WASH5P-204ENST00000632292 975 ntBASIC31.86■■■□□ 2.69
CYP46A1Q9Y6A2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CYP46A1Q9Y6A2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CYP46A1Q9Y6A2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CYP46A1Q9Y6A2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
CYP46A1Q9Y6A2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
CYP46A1Q9Y6A2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
CYP46A1Q9Y6A2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CYP46A1Q9Y6A2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
CYP46A1Q9Y6A2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.83■■■□□ 2.69
CYP46A1Q9Y6A2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
CYP46A1Q9Y6A2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CYP46A1Q9Y6A2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.8■■■□□ 2.68
CYP46A1Q9Y6A2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CYP46A1Q9Y6A2 RARRES2P7-201ENST00000567349 469 ntBASIC31.79■■■□□ 2.68
CYP46A1Q9Y6A2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CYP46A1Q9Y6A2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.77■■■□□ 2.68
CYP46A1Q9Y6A2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CYP46A1Q9Y6A2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.75■■■□□ 2.67
CYP46A1Q9Y6A2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
CYP46A1Q9Y6A2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CYP46A1Q9Y6A2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CYP46A1Q9Y6A2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CYP46A1Q9Y6A2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
CYP46A1Q9Y6A2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.73■■■□□ 2.67
CYP46A1Q9Y6A2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CYP46A1Q9Y6A2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.72■■■□□ 2.67
CYP46A1Q9Y6A2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CYP46A1Q9Y6A2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CYP46A1Q9Y6A2 ST7-AS1-201ENST00000456775 1889 ntBASIC31.71■■■□□ 2.67
CYP46A1Q9Y6A2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CYP46A1Q9Y6A2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CYP46A1Q9Y6A2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CYP46A1Q9Y6A2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CYP46A1Q9Y6A2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CYP46A1Q9Y6A2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CYP46A1Q9Y6A2 SETD8P1-201ENST00000623146 1180 ntBASIC31.69■■■□□ 2.66
CYP46A1Q9Y6A2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CYP46A1Q9Y6A2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CYP46A1Q9Y6A2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CYP46A1Q9Y6A2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
CYP46A1Q9Y6A2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CYP46A1Q9Y6A2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CYP46A1Q9Y6A2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CYP46A1Q9Y6A2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CYP46A1Q9Y6A2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms