Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
HCFC2Q9Y5Z7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
HCFC2Q9Y5Z7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.08■■■□□ 2.25
HCFC2Q9Y5Z7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.08■■■□□ 2.25
HCFC2Q9Y5Z7 WASH5P-204ENST00000632292 975 ntBASIC29.06■■■□□ 2.24
HCFC2Q9Y5Z7 ZNRF2P2-203ENST00000454624 420 ntBASIC29.04■■■□□ 2.24
HCFC2Q9Y5Z7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
HCFC2Q9Y5Z7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
HCFC2Q9Y5Z7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.02■■■□□ 2.24
HCFC2Q9Y5Z7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
HCFC2Q9Y5Z7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.02■■■□□ 2.24
HCFC2Q9Y5Z7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.01■■■□□ 2.23
HCFC2Q9Y5Z7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
HCFC2Q9Y5Z7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
HCFC2Q9Y5Z7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
HCFC2Q9Y5Z7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
HCFC2Q9Y5Z7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
HCFC2Q9Y5Z7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
HCFC2Q9Y5Z7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
HCFC2Q9Y5Z7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
HCFC2Q9Y5Z7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
HCFC2Q9Y5Z7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.95■■■□□ 2.22
HCFC2Q9Y5Z7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.94■■■□□ 2.22
HCFC2Q9Y5Z7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
HCFC2Q9Y5Z7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
HCFC2Q9Y5Z7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.93■■■□□ 2.22
HCFC2Q9Y5Z7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.92■■■□□ 2.22
HCFC2Q9Y5Z7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
HCFC2Q9Y5Z7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
HCFC2Q9Y5Z7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.91■■■□□ 2.22
HCFC2Q9Y5Z7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
HCFC2Q9Y5Z7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
HCFC2Q9Y5Z7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
HCFC2Q9Y5Z7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.89■■■□□ 2.22
HCFC2Q9Y5Z7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.88■■■□□ 2.21
HCFC2Q9Y5Z7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.86■■■□□ 2.21
HCFC2Q9Y5Z7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
HCFC2Q9Y5Z7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
HCFC2Q9Y5Z7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
HCFC2Q9Y5Z7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
HCFC2Q9Y5Z7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
HCFC2Q9Y5Z7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
HCFC2Q9Y5Z7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.83■■■□□ 2.21
HCFC2Q9Y5Z7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
HCFC2Q9Y5Z7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
HCFC2Q9Y5Z7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
HCFC2Q9Y5Z7 DUX4L29-201ENST00000425409 679 ntBASIC28.8■■■□□ 2.2
HCFC2Q9Y5Z7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
HCFC2Q9Y5Z7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
HCFC2Q9Y5Z7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
HCFC2Q9Y5Z7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.79■■■□□ 2.2
HCFC2Q9Y5Z7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
HCFC2Q9Y5Z7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
HCFC2Q9Y5Z7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
HCFC2Q9Y5Z7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
HCFC2Q9Y5Z7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.75■■■□□ 2.19
HCFC2Q9Y5Z7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
HCFC2Q9Y5Z7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
HCFC2Q9Y5Z7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
HCFC2Q9Y5Z7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.72■■■□□ 2.19
HCFC2Q9Y5Z7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
HCFC2Q9Y5Z7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
HCFC2Q9Y5Z7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
HCFC2Q9Y5Z7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
HCFC2Q9Y5Z7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.7■■■□□ 2.19
HCFC2Q9Y5Z7 AC021231.2-201ENST00000594613 730 ntBASIC28.7■■■□□ 2.18
HCFC2Q9Y5Z7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
HCFC2Q9Y5Z7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.68■■■□□ 2.18
HCFC2Q9Y5Z7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.68■■■□□ 2.18
HCFC2Q9Y5Z7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
HCFC2Q9Y5Z7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
HCFC2Q9Y5Z7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
HCFC2Q9Y5Z7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
HCFC2Q9Y5Z7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.64■■■□□ 2.18
HCFC2Q9Y5Z7 MIR4449-201ENST00000578365 66 ntBASIC28.63■■■□□ 2.17
HCFC2Q9Y5Z7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.63■■■□□ 2.17
HCFC2Q9Y5Z7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
HCFC2Q9Y5Z7 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
HCFC2Q9Y5Z7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.62■■■□□ 2.17
HCFC2Q9Y5Z7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
HCFC2Q9Y5Z7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.6■■■□□ 2.17
HCFC2Q9Y5Z7 MIR639-201ENST00000384974 98 ntBASIC28.59■■■□□ 2.17
HCFC2Q9Y5Z7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
HCFC2Q9Y5Z7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.57■■■□□ 2.16
HCFC2Q9Y5Z7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
HCFC2Q9Y5Z7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.57■■■□□ 2.16
HCFC2Q9Y5Z7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
HCFC2Q9Y5Z7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
HCFC2Q9Y5Z7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.56■■■□□ 2.16
HCFC2Q9Y5Z7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
HCFC2Q9Y5Z7 AC108673.1-201ENST00000510422 1159 ntBASIC28.55■■■□□ 2.16
HCFC2Q9Y5Z7 MIR6090-201ENST00000622481 60 ntBASIC28.55■■■□□ 2.16
HCFC2Q9Y5Z7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.54■■■□□ 2.16
HCFC2Q9Y5Z7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
HCFC2Q9Y5Z7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
HCFC2Q9Y5Z7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.53■■■□□ 2.16
HCFC2Q9Y5Z7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
HCFC2Q9Y5Z7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.52■■■□□ 2.16
HCFC2Q9Y5Z7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.51■■■□□ 2.15
HCFC2Q9Y5Z7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.51■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms