Protein–RNA interactions for Protein: Q9Y3P9

RABGAP1, Rab GTPase-activating protein 1, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1Q9Y3P9 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RABGAP1Q9Y3P9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
RABGAP1Q9Y3P9 WASH5P-204ENST00000632292 975 ntBASIC31.73■■■□□ 2.67
RABGAP1Q9Y3P9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
RABGAP1Q9Y3P9 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.72■■■□□ 2.67
RABGAP1Q9Y3P9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
RABGAP1Q9Y3P9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.67■■■□□ 2.66
RABGAP1Q9Y3P9 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
RABGAP1Q9Y3P9 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RABGAP1Q9Y3P9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
RABGAP1Q9Y3P9 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
RABGAP1Q9Y3P9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RABGAP1Q9Y3P9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.61■■■□□ 2.65
RABGAP1Q9Y3P9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.61■■■□□ 2.65
RABGAP1Q9Y3P9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
RABGAP1Q9Y3P9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.61■■■□□ 2.65
RABGAP1Q9Y3P9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.61■■■□□ 2.65
RABGAP1Q9Y3P9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RABGAP1Q9Y3P9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RABGAP1Q9Y3P9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.58■■■□□ 2.65
RABGAP1Q9Y3P9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.58■■■□□ 2.65
RABGAP1Q9Y3P9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.58■■■□□ 2.65
RABGAP1Q9Y3P9 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RABGAP1Q9Y3P9 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
RABGAP1Q9Y3P9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
RABGAP1Q9Y3P9 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.54■■■□□ 2.64
RABGAP1Q9Y3P9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RABGAP1Q9Y3P9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.53■■■□□ 2.64
RABGAP1Q9Y3P9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
RABGAP1Q9Y3P9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.52■■■□□ 2.64
RABGAP1Q9Y3P9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.52■■■□□ 2.64
RABGAP1Q9Y3P9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
RABGAP1Q9Y3P9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.51■■■□□ 2.63
RABGAP1Q9Y3P9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RABGAP1Q9Y3P9 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RABGAP1Q9Y3P9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RABGAP1Q9Y3P9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
RABGAP1Q9Y3P9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RABGAP1Q9Y3P9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RABGAP1Q9Y3P9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RABGAP1Q9Y3P9 ZNRF2P2-203ENST00000454624 420 ntBASIC31.47■■■□□ 2.63
RABGAP1Q9Y3P9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RABGAP1Q9Y3P9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
RABGAP1Q9Y3P9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.46■■■□□ 2.63
RABGAP1Q9Y3P9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RABGAP1Q9Y3P9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.45■■■□□ 2.63
RABGAP1Q9Y3P9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
RABGAP1Q9Y3P9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RABGAP1Q9Y3P9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
RABGAP1Q9Y3P9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
RABGAP1Q9Y3P9 HLA-V-202ENST00000446817 847 ntBASIC31.43■■■□□ 2.62
RABGAP1Q9Y3P9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.43■■■□□ 2.62
RABGAP1Q9Y3P9 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.42■■■□□ 2.62
RABGAP1Q9Y3P9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
RABGAP1Q9Y3P9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
RABGAP1Q9Y3P9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
RABGAP1Q9Y3P9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.39■■■□□ 2.62
RABGAP1Q9Y3P9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
RABGAP1Q9Y3P9 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RABGAP1Q9Y3P9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RABGAP1Q9Y3P9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RABGAP1Q9Y3P9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.37■■■□□ 2.61
RABGAP1Q9Y3P9 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RABGAP1Q9Y3P9 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.36■■■□□ 2.61
RABGAP1Q9Y3P9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.36■■■□□ 2.61
RABGAP1Q9Y3P9 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.36■■■□□ 2.61
RABGAP1Q9Y3P9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RABGAP1Q9Y3P9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RABGAP1Q9Y3P9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.35■■■□□ 2.61
RABGAP1Q9Y3P9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RABGAP1Q9Y3P9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
RABGAP1Q9Y3P9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RABGAP1Q9Y3P9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.33■■■□□ 2.61
RABGAP1Q9Y3P9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.32■■■□□ 2.6
RABGAP1Q9Y3P9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RABGAP1Q9Y3P9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.31■■■□□ 2.6
RABGAP1Q9Y3P9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RABGAP1Q9Y3P9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
RABGAP1Q9Y3P9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RABGAP1Q9Y3P9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RABGAP1Q9Y3P9 DUX4L29-201ENST00000425409 679 ntBASIC31.29■■■□□ 2.6
RABGAP1Q9Y3P9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RABGAP1Q9Y3P9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
RABGAP1Q9Y3P9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.27■■■□□ 2.6
RABGAP1Q9Y3P9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.27■■■□□ 2.6
RABGAP1Q9Y3P9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
RABGAP1Q9Y3P9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
RABGAP1Q9Y3P9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RABGAP1Q9Y3P9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
RABGAP1Q9Y3P9 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
RABGAP1Q9Y3P9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.23■■■□□ 2.59
RABGAP1Q9Y3P9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.23■■■□□ 2.59
RABGAP1Q9Y3P9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RABGAP1Q9Y3P9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
RABGAP1Q9Y3P9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
RABGAP1Q9Y3P9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RABGAP1Q9Y3P9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
RABGAP1Q9Y3P9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RABGAP1Q9Y3P9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.19■■■□□ 2.58
RABGAP1Q9Y3P9 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms