Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
PCDHA6Q9UN73 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PCDHA6Q9UN73 AL391121.1-201ENST00000607967 1349 ntBASIC31.31■■■□□ 2.6
PCDHA6Q9UN73 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.31■■■□□ 2.6
PCDHA6Q9UN73 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PCDHA6Q9UN73 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
PCDHA6Q9UN73 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PCDHA6Q9UN73 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PCDHA6Q9UN73 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.28■■■□□ 2.6
PCDHA6Q9UN73 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
PCDHA6Q9UN73 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PCDHA6Q9UN73 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PCDHA6Q9UN73 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
PCDHA6Q9UN73 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PCDHA6Q9UN73 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PCDHA6Q9UN73 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.24■■■□□ 2.59
PCDHA6Q9UN73 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PCDHA6Q9UN73 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PCDHA6Q9UN73 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
PCDHA6Q9UN73 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PCDHA6Q9UN73 WASH5P-204ENST00000632292 975 ntBASIC31.17■■■□□ 2.58
PCDHA6Q9UN73 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.16■■■□□ 2.58
PCDHA6Q9UN73 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PCDHA6Q9UN73 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PCDHA6Q9UN73 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PCDHA6Q9UN73 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PCDHA6Q9UN73 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
PCDHA6Q9UN73 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.14■■■□□ 2.58
PCDHA6Q9UN73 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
PCDHA6Q9UN73 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.13■■■□□ 2.57
PCDHA6Q9UN73 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PCDHA6Q9UN73 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PCDHA6Q9UN73 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PCDHA6Q9UN73 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PCDHA6Q9UN73 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
PCDHA6Q9UN73 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PCDHA6Q9UN73 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PCDHA6Q9UN73 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
PCDHA6Q9UN73 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
PCDHA6Q9UN73 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
PCDHA6Q9UN73 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
PCDHA6Q9UN73 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
PCDHA6Q9UN73 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.04■■■□□ 2.56
PCDHA6Q9UN73 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PCDHA6Q9UN73 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.02■■■□□ 2.56
PCDHA6Q9UN73 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.02■■■□□ 2.56
PCDHA6Q9UN73 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31■■■□□ 2.55
PCDHA6Q9UN73 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PCDHA6Q9UN73 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
PCDHA6Q9UN73 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PCDHA6Q9UN73 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
PCDHA6Q9UN73 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PCDHA6Q9UN73 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
PCDHA6Q9UN73 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.95■■■□□ 2.54
PCDHA6Q9UN73 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
PCDHA6Q9UN73 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
PCDHA6Q9UN73 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PCDHA6Q9UN73 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PCDHA6Q9UN73 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.9■■■□□ 2.54
PCDHA6Q9UN73 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.89■■■□□ 2.54
PCDHA6Q9UN73 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.89■■■□□ 2.54
PCDHA6Q9UN73 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.89■■■□□ 2.54
PCDHA6Q9UN73 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PCDHA6Q9UN73 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
PCDHA6Q9UN73 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
PCDHA6Q9UN73 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCDHA6Q9UN73 MIR762-201ENST00000390236 83 ntBASIC30.85■■■□□ 2.53
PCDHA6Q9UN73 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
PCDHA6Q9UN73 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCDHA6Q9UN73 AL161658.1-201ENST00000623641 1967 ntBASIC30.83■■■□□ 2.53
PCDHA6Q9UN73 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.82■■■□□ 2.52
PCDHA6Q9UN73 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.82■■■□□ 2.52
PCDHA6Q9UN73 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.82■■■□□ 2.52
PCDHA6Q9UN73 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCDHA6Q9UN73 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.81■■■□□ 2.52
PCDHA6Q9UN73 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHA6Q9UN73 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.81■■■□□ 2.52
PCDHA6Q9UN73 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHA6Q9UN73 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.81■■■□□ 2.52
PCDHA6Q9UN73 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHA6Q9UN73 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.8■■■□□ 2.52
PCDHA6Q9UN73 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PCDHA6Q9UN73 AP006261.1-201ENST00000584783 668 ntBASIC30.8■■■□□ 2.52
PCDHA6Q9UN73 AL162393.1-201ENST00000437852 946 ntBASIC30.79■■■□□ 2.52
PCDHA6Q9UN73 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.79■■■□□ 2.52
PCDHA6Q9UN73 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PCDHA6Q9UN73 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.78■■■□□ 2.52
PCDHA6Q9UN73 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PCDHA6Q9UN73 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PCDHA6Q9UN73 RPS2P35-201ENST00000443417 897 ntBASIC30.77■■■□□ 2.52
PCDHA6Q9UN73 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.76■■■□□ 2.51
PCDHA6Q9UN73 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PCDHA6Q9UN73 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
PCDHA6Q9UN73 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.75■■■□□ 2.51
PCDHA6Q9UN73 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.75■■■□□ 2.51
PCDHA6Q9UN73 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PCDHA6Q9UN73 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PCDHA6Q9UN73 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
PCDHA6Q9UN73 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PCDHA6Q9UN73 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms