Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PCDHA7Q9UN72 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
PCDHA7Q9UN72 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31■■■□□ 2.55
PCDHA7Q9UN72 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.99■■■□□ 2.55
PCDHA7Q9UN72 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
PCDHA7Q9UN72 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.96■■■□□ 2.55
PCDHA7Q9UN72 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
PCDHA7Q9UN72 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
PCDHA7Q9UN72 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
PCDHA7Q9UN72 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.94■■■□□ 2.54
PCDHA7Q9UN72 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.94■■■□□ 2.54
PCDHA7Q9UN72 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.93■■■□□ 2.54
PCDHA7Q9UN72 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
PCDHA7Q9UN72 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
PCDHA7Q9UN72 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
PCDHA7Q9UN72 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
PCDHA7Q9UN72 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PCDHA7Q9UN72 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PCDHA7Q9UN72 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCDHA7Q9UN72 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PCDHA7Q9UN72 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
PCDHA7Q9UN72 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.83■■■□□ 2.53
PCDHA7Q9UN72 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCDHA7Q9UN72 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.82■■■□□ 2.52
PCDHA7Q9UN72 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.82■■■□□ 2.52
PCDHA7Q9UN72 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCDHA7Q9UN72 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHA7Q9UN72 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.81■■■□□ 2.52
PCDHA7Q9UN72 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.81■■■□□ 2.52
PCDHA7Q9UN72 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PCDHA7Q9UN72 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
PCDHA7Q9UN72 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PCDHA7Q9UN72 AL161658.1-201ENST00000623641 1967 ntBASIC30.77■■■□□ 2.52
PCDHA7Q9UN72 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PCDHA7Q9UN72 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
PCDHA7Q9UN72 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.76■■■□□ 2.51
PCDHA7Q9UN72 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
PCDHA7Q9UN72 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.75■■■□□ 2.51
PCDHA7Q9UN72 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
PCDHA7Q9UN72 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.74■■■□□ 2.51
PCDHA7Q9UN72 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PCDHA7Q9UN72 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
PCDHA7Q9UN72 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCDHA7Q9UN72 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.73■■■□□ 2.51
PCDHA7Q9UN72 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCDHA7Q9UN72 ABCB10P3-201ENST00000561950 2166 ntBASIC30.72■■■□□ 2.51
PCDHA7Q9UN72 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PCDHA7Q9UN72 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.71■■■□□ 2.51
PCDHA7Q9UN72 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.71■■■□□ 2.51
PCDHA7Q9UN72 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.71■■■□□ 2.51
PCDHA7Q9UN72 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PCDHA7Q9UN72 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.7■■■□□ 2.51
PCDHA7Q9UN72 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
PCDHA7Q9UN72 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
PCDHA7Q9UN72 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHA7Q9UN72 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PCDHA7Q9UN72 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDHA7Q9UN72 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDHA7Q9UN72 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDHA7Q9UN72 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PCDHA7Q9UN72 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHA7Q9UN72 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
PCDHA7Q9UN72 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHA7Q9UN72 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
PCDHA7Q9UN72 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PCDHA7Q9UN72 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PCDHA7Q9UN72 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.65■■■□□ 2.5
PCDHA7Q9UN72 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30.64■■■□□ 2.5
PCDHA7Q9UN72 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCDHA7Q9UN72 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PCDHA7Q9UN72 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCDHA7Q9UN72 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCDHA7Q9UN72 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCDHA7Q9UN72 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
PCDHA7Q9UN72 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PCDHA7Q9UN72 ST7-AS1-201ENST00000456775 1889 ntBASIC30.6■■■□□ 2.49
PCDHA7Q9UN72 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCDHA7Q9UN72 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PCDHA7Q9UN72 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
PCDHA7Q9UN72 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
PCDHA7Q9UN72 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
PCDHA7Q9UN72 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PCDHA7Q9UN72 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PCDHA7Q9UN72 AC139426.1-201ENST00000568218 2529 ntBASIC30.56■■■□□ 2.48
PCDHA7Q9UN72 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
PCDHA7Q9UN72 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
PCDHA7Q9UN72 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
PCDHA7Q9UN72 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PCDHA7Q9UN72 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
PCDHA7Q9UN72 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PCDHA7Q9UN72 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
PCDHA7Q9UN72 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
PCDHA7Q9UN72 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCDHA7Q9UN72 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCDHA7Q9UN72 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PCDHA7Q9UN72 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PCDHA7Q9UN72 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PCDHA7Q9UN72 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PCDHA7Q9UN72 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PCDHA7Q9UN72 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms