Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CPA4Q9UI42 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
CPA4Q9UI42 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CPA4Q9UI42 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.84■■■□□ 2.69
CPA4Q9UI42 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CPA4Q9UI42 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
CPA4Q9UI42 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CPA4Q9UI42 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.81■■■□□ 2.68
CPA4Q9UI42 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
CPA4Q9UI42 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.8■■■□□ 2.68
CPA4Q9UI42 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CPA4Q9UI42 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.78■■■□□ 2.68
CPA4Q9UI42 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.78■■■□□ 2.68
CPA4Q9UI42 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CPA4Q9UI42 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
CPA4Q9UI42 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CPA4Q9UI42 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.77■■■□□ 2.68
CPA4Q9UI42 WASH5P-204ENST00000632292 975 ntBASIC31.77■■■□□ 2.68
CPA4Q9UI42 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.76■■■□□ 2.67
CPA4Q9UI42 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CPA4Q9UI42 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CPA4Q9UI42 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CPA4Q9UI42 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
CPA4Q9UI42 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CPA4Q9UI42 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.71■■■□□ 2.67
CPA4Q9UI42 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CPA4Q9UI42 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
CPA4Q9UI42 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CPA4Q9UI42 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
CPA4Q9UI42 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
CPA4Q9UI42 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
CPA4Q9UI42 DUX4L29-201ENST00000425409 679 ntBASIC31.68■■■□□ 2.66
CPA4Q9UI42 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CPA4Q9UI42 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CPA4Q9UI42 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CPA4Q9UI42 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.64■■■□□ 2.66
CPA4Q9UI42 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CPA4Q9UI42 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CPA4Q9UI42 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CPA4Q9UI42 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CPA4Q9UI42 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CPA4Q9UI42 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
CPA4Q9UI42 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.6■■■□□ 2.65
CPA4Q9UI42 MIR4449-201ENST00000578365 66 ntBASIC31.6■■■□□ 2.65
CPA4Q9UI42 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.58■■■□□ 2.65
CPA4Q9UI42 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.57■■■□□ 2.64
CPA4Q9UI42 AC021231.2-201ENST00000594613 730 ntBASIC31.57■■■□□ 2.64
CPA4Q9UI42 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CPA4Q9UI42 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CPA4Q9UI42 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CPA4Q9UI42 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CPA4Q9UI42 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.53■■■□□ 2.64
CPA4Q9UI42 MIR639-201ENST00000384974 98 ntBASIC31.52■■■□□ 2.64
CPA4Q9UI42 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
CPA4Q9UI42 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CPA4Q9UI42 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CPA4Q9UI42 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.5■■■□□ 2.63
CPA4Q9UI42 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CPA4Q9UI42 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CPA4Q9UI42 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CPA4Q9UI42 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.47■■■□□ 2.63
CPA4Q9UI42 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.46■■■□□ 2.63
CPA4Q9UI42 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CPA4Q9UI42 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.41■■■□□ 2.62
CPA4Q9UI42 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.41■■■□□ 2.62
CPA4Q9UI42 AC016575.1-201ENST00000607026 382 ntBASIC31.4■■■□□ 2.62
CPA4Q9UI42 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CPA4Q9UI42 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CPA4Q9UI42 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CPA4Q9UI42 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
CPA4Q9UI42 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
CPA4Q9UI42 MIR3648-2-201ENST00000581792 180 ntBASIC31.37■■■□□ 2.61
CPA4Q9UI42 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.37■■■□□ 2.61
CPA4Q9UI42 MIR3648-1-201ENST00000615959 180 ntBASIC31.37■■■□□ 2.61
CPA4Q9UI42 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.36■■■□□ 2.61
CPA4Q9UI42 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CPA4Q9UI42 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CPA4Q9UI42 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CPA4Q9UI42 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CPA4Q9UI42 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CPA4Q9UI42 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.35■■■□□ 2.61
CPA4Q9UI42 MIR6090-201ENST00000622481 60 ntBASIC31.34■■■□□ 2.61
CPA4Q9UI42 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.33■■■□□ 2.61
CPA4Q9UI42 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.32■■■□□ 2.6
CPA4Q9UI42 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CPA4Q9UI42 HSD17B1P1-201ENST00000590052 955 ntBASIC31.31■■■□□ 2.6
CPA4Q9UI42 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CPA4Q9UI42 AC108673.1-201ENST00000510422 1159 ntBASIC31.28■■■□□ 2.6
CPA4Q9UI42 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.27■■■□□ 2.6
CPA4Q9UI42 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.27■■■□□ 2.6
CPA4Q9UI42 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.27■■■□□ 2.6
CPA4Q9UI42 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.26■■■□□ 2.59
CPA4Q9UI42 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.26■■■□□ 2.59
CPA4Q9UI42 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
CPA4Q9UI42 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
CPA4Q9UI42 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.25■■■□□ 2.59
CPA4Q9UI42 DUX4L11-201ENST00000611504 1267 ntBASIC31.24■■■□□ 2.59
CPA4Q9UI42 DUX4L12-201ENST00000614593 1267 ntBASIC31.24■■■□□ 2.59
CPA4Q9UI42 DUX4L14-201ENST00000621227 1267 ntBASIC31.24■■■□□ 2.59
CPA4Q9UI42 CR559946.2-201ENST00000623684 991 ntBASIC31.23■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms