Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MIR762-201ENST00000390236 83 ntBASIC31.17■■■□□ 2.58
COL20A1Q9P218 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.16■■■□□ 2.58
COL20A1Q9P218 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
COL20A1Q9P218 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.15■■■□□ 2.58
COL20A1Q9P218 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.15■■■□□ 2.58
COL20A1Q9P218 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.15■■■□□ 2.58
COL20A1Q9P218 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
COL20A1Q9P218 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.13■■■□□ 2.57
COL20A1Q9P218 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
COL20A1Q9P218 DUX4L28-201ENST00000623687 678 ntBASIC31.12■■■□□ 2.57
COL20A1Q9P218 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
COL20A1Q9P218 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
COL20A1Q9P218 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
COL20A1Q9P218 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.11■■■□□ 2.57
COL20A1Q9P218 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
COL20A1Q9P218 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.09■■■□□ 2.57
COL20A1Q9P218 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
COL20A1Q9P218 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
COL20A1Q9P218 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
COL20A1Q9P218 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
COL20A1Q9P218 MIR3665-201ENST00000578708 105 ntBASIC31.06■■■□□ 2.56
COL20A1Q9P218 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.06■■■□□ 2.56
COL20A1Q9P218 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
COL20A1Q9P218 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL20A1Q9P218 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
COL20A1Q9P218 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL20A1Q9P218 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
COL20A1Q9P218 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
COL20A1Q9P218 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
COL20A1Q9P218 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.01■■■□□ 2.55
COL20A1Q9P218 AC005559.1-201ENST00000589661 871 ntBASIC31.01■■■□□ 2.55
COL20A1Q9P218 AC087741.3-201ENST00000624270 1347 ntBASIC31■■■□□ 2.55
COL20A1Q9P218 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
COL20A1Q9P218 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
COL20A1Q9P218 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
COL20A1Q9P218 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL20A1Q9P218 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
COL20A1Q9P218 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
COL20A1Q9P218 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.94■■■□□ 2.54
COL20A1Q9P218 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
COL20A1Q9P218 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
COL20A1Q9P218 AC120057.4-201ENST00000624722 1615 ntBASIC30.91■■■□□ 2.54
COL20A1Q9P218 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.91■■■□□ 2.54
COL20A1Q9P218 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.9■■■□□ 2.54
COL20A1Q9P218 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
COL20A1Q9P218 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.88■■■□□ 2.53
COL20A1Q9P218 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
COL20A1Q9P218 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.87■■■□□ 2.53
COL20A1Q9P218 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.87■■■□□ 2.53
COL20A1Q9P218 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
COL20A1Q9P218 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
COL20A1Q9P218 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
COL20A1Q9P218 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL20A1Q9P218 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
COL20A1Q9P218 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.83■■■□□ 2.53
COL20A1Q9P218 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
COL20A1Q9P218 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
COL20A1Q9P218 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
COL20A1Q9P218 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.79■■■□□ 2.52
COL20A1Q9P218 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
COL20A1Q9P218 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.79■■■□□ 2.52
COL20A1Q9P218 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
COL20A1Q9P218 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
COL20A1Q9P218 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
COL20A1Q9P218 AC044849.2-201ENST00000606596 710 ntBASIC30.77■■■□□ 2.52
COL20A1Q9P218 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
COL20A1Q9P218 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
COL20A1Q9P218 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
COL20A1Q9P218 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.74■■■□□ 2.51
COL20A1Q9P218 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
COL20A1Q9P218 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
COL20A1Q9P218 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
COL20A1Q9P218 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
COL20A1Q9P218 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
COL20A1Q9P218 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
COL20A1Q9P218 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.72■■■□□ 2.51
COL20A1Q9P218 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
COL20A1Q9P218 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
COL20A1Q9P218 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
COL20A1Q9P218 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
COL20A1Q9P218 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
COL20A1Q9P218 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
COL20A1Q9P218 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.69■■■□□ 2.5
COL20A1Q9P218 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
COL20A1Q9P218 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.68■■■□□ 2.5
COL20A1Q9P218 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.68■■■□□ 2.5
COL20A1Q9P218 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
COL20A1Q9P218 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
COL20A1Q9P218 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.67■■■□□ 2.5
COL20A1Q9P218 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
COL20A1Q9P218 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
COL20A1Q9P218 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
COL20A1Q9P218 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
COL20A1Q9P218 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
COL20A1Q9P218 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL20A1Q9P218 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
COL20A1Q9P218 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.63■■■□□ 2.49
COL20A1Q9P218 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
COL20A1Q9P218 ABHD17AP4-201ENST00000411545 909 ntBASIC30.62■■■□□ 2.49
COL20A1Q9P218 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms