Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CSNK1G1Q9HCP0 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.73■■■□□ 2.19
CSNK1G1Q9HCP0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CSNK1G1Q9HCP0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CSNK1G1Q9HCP0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CSNK1G1Q9HCP0 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.72■■■□□ 2.19
CSNK1G1Q9HCP0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
CSNK1G1Q9HCP0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CSNK1G1Q9HCP0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.69■■■□□ 2.18
CSNK1G1Q9HCP0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CSNK1G1Q9HCP0 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CSNK1G1Q9HCP0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CSNK1G1Q9HCP0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
CSNK1G1Q9HCP0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CSNK1G1Q9HCP0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CSNK1G1Q9HCP0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
CSNK1G1Q9HCP0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
CSNK1G1Q9HCP0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.63■■■□□ 2.17
CSNK1G1Q9HCP0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CSNK1G1Q9HCP0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CSNK1G1Q9HCP0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CSNK1G1Q9HCP0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
CSNK1G1Q9HCP0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CSNK1G1Q9HCP0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.59■■■□□ 2.17
CSNK1G1Q9HCP0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
CSNK1G1Q9HCP0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
CSNK1G1Q9HCP0 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.55■■■□□ 2.16
CSNK1G1Q9HCP0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CSNK1G1Q9HCP0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CSNK1G1Q9HCP0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CSNK1G1Q9HCP0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
CSNK1G1Q9HCP0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.5■■■□□ 2.15
CSNK1G1Q9HCP0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CSNK1G1Q9HCP0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CSNK1G1Q9HCP0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CSNK1G1Q9HCP0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.49■■■□□ 2.15
CSNK1G1Q9HCP0 MIR762-201ENST00000390236 83 ntBASIC28.49■■■□□ 2.15
CSNK1G1Q9HCP0 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.49■■■□□ 2.15
CSNK1G1Q9HCP0 AP006261.1-201ENST00000584783 668 ntBASIC28.48■■■□□ 2.15
CSNK1G1Q9HCP0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CSNK1G1Q9HCP0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.46■■■□□ 2.15
CSNK1G1Q9HCP0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
CSNK1G1Q9HCP0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CSNK1G1Q9HCP0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
CSNK1G1Q9HCP0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.44■■■□□ 2.14
CSNK1G1Q9HCP0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CSNK1G1Q9HCP0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CSNK1G1Q9HCP0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.42■■■□□ 2.14
CSNK1G1Q9HCP0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CSNK1G1Q9HCP0 AL162393.1-201ENST00000437852 946 ntBASIC28.42■■■□□ 2.14
CSNK1G1Q9HCP0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.42■■■□□ 2.14
CSNK1G1Q9HCP0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CSNK1G1Q9HCP0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CSNK1G1Q9HCP0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CSNK1G1Q9HCP0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.4■■■□□ 2.14
CSNK1G1Q9HCP0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.4■■■□□ 2.14
CSNK1G1Q9HCP0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
CSNK1G1Q9HCP0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.39■■■□□ 2.14
CSNK1G1Q9HCP0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CSNK1G1Q9HCP0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CSNK1G1Q9HCP0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.38■■■□□ 2.13
CSNK1G1Q9HCP0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CSNK1G1Q9HCP0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
CSNK1G1Q9HCP0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CSNK1G1Q9HCP0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
CSNK1G1Q9HCP0 MIR3665-201ENST00000578708 105 ntBASIC28.36■■■□□ 2.13
CSNK1G1Q9HCP0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CSNK1G1Q9HCP0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CSNK1G1Q9HCP0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CSNK1G1Q9HCP0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CSNK1G1Q9HCP0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CSNK1G1Q9HCP0 AC005559.1-201ENST00000589661 871 ntBASIC28.35■■■□□ 2.13
CSNK1G1Q9HCP0 DUX4L28-201ENST00000623687 678 ntBASIC28.35■■■□□ 2.13
CSNK1G1Q9HCP0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
CSNK1G1Q9HCP0 RPS2P35-201ENST00000443417 897 ntBASIC28.34■■■□□ 2.13
CSNK1G1Q9HCP0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
CSNK1G1Q9HCP0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CSNK1G1Q9HCP0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CSNK1G1Q9HCP0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.33■■■□□ 2.13
CSNK1G1Q9HCP0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CSNK1G1Q9HCP0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CSNK1G1Q9HCP0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.32■■■□□ 2.12
CSNK1G1Q9HCP0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CSNK1G1Q9HCP0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CSNK1G1Q9HCP0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
CSNK1G1Q9HCP0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.26■■■□□ 2.12
CSNK1G1Q9HCP0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
CSNK1G1Q9HCP0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CSNK1G1Q9HCP0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CSNK1G1Q9HCP0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.25■■■□□ 2.11
CSNK1G1Q9HCP0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CSNK1G1Q9HCP0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CSNK1G1Q9HCP0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
CSNK1G1Q9HCP0 AC087741.3-201ENST00000624270 1347 ntBASIC28.23■■■□□ 2.11
CSNK1G1Q9HCP0 AL161658.1-201ENST00000623641 1967 ntBASIC28.23■■■□□ 2.11
CSNK1G1Q9HCP0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CSNK1G1Q9HCP0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CSNK1G1Q9HCP0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.21■■■□□ 2.11
CSNK1G1Q9HCP0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
CSNK1G1Q9HCP0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms