Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.9■■■□□ 2.7
SH2D4AQ9H788 AC087741.3-201ENST00000624270 1347 ntBASIC31.9■■■□□ 2.7
SH2D4AQ9H788 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SH2D4AQ9H788 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SH2D4AQ9H788 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SH2D4AQ9H788 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
SH2D4AQ9H788 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
SH2D4AQ9H788 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
SH2D4AQ9H788 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.84■■■□□ 2.69
SH2D4AQ9H788 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.84■■■□□ 2.69
SH2D4AQ9H788 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.84■■■□□ 2.69
SH2D4AQ9H788 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.83■■■□□ 2.69
SH2D4AQ9H788 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SH2D4AQ9H788 AC044849.2-201ENST00000606596 710 ntBASIC31.83■■■□□ 2.69
SH2D4AQ9H788 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
SH2D4AQ9H788 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.82■■■□□ 2.68
SH2D4AQ9H788 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.82■■■□□ 2.68
SH2D4AQ9H788 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SH2D4AQ9H788 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.81■■■□□ 2.68
SH2D4AQ9H788 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SH2D4AQ9H788 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SH2D4AQ9H788 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
SH2D4AQ9H788 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SH2D4AQ9H788 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SH2D4AQ9H788 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SH2D4AQ9H788 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SH2D4AQ9H788 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
SH2D4AQ9H788 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
SH2D4AQ9H788 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SH2D4AQ9H788 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SH2D4AQ9H788 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SH2D4AQ9H788 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SH2D4AQ9H788 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SH2D4AQ9H788 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
SH2D4AQ9H788 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.72■■■□□ 2.67
SH2D4AQ9H788 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.72■■■□□ 2.67
SH2D4AQ9H788 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SH2D4AQ9H788 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
SH2D4AQ9H788 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SH2D4AQ9H788 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.69■■■□□ 2.66
SH2D4AQ9H788 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.69■■■□□ 2.66
SH2D4AQ9H788 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
SH2D4AQ9H788 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SH2D4AQ9H788 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
SH2D4AQ9H788 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SH2D4AQ9H788 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SH2D4AQ9H788 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.66■■■□□ 2.66
SH2D4AQ9H788 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
SH2D4AQ9H788 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SH2D4AQ9H788 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SH2D4AQ9H788 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.64■■■□□ 2.66
SH2D4AQ9H788 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SH2D4AQ9H788 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
SH2D4AQ9H788 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
SH2D4AQ9H788 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SH2D4AQ9H788 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SH2D4AQ9H788 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.61■■■□□ 2.65
SH2D4AQ9H788 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SH2D4AQ9H788 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SH2D4AQ9H788 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SH2D4AQ9H788 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SH2D4AQ9H788 ABHD17AP4-201ENST00000411545 909 ntBASIC31.59■■■□□ 2.65
SH2D4AQ9H788 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SH2D4AQ9H788 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.58■■■□□ 2.65
SH2D4AQ9H788 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SH2D4AQ9H788 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
SH2D4AQ9H788 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.55■■■□□ 2.64
SH2D4AQ9H788 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.53■■■□□ 2.64
SH2D4AQ9H788 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SH2D4AQ9H788 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
SH2D4AQ9H788 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
SH2D4AQ9H788 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SH2D4AQ9H788 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SH2D4AQ9H788 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.48■■■□□ 2.63
SH2D4AQ9H788 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SH2D4AQ9H788 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC31.47■■■□□ 2.63
SH2D4AQ9H788 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.46■■■□□ 2.63
SH2D4AQ9H788 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.46■■■□□ 2.63
SH2D4AQ9H788 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.46■■■□□ 2.63
SH2D4AQ9H788 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.46■■■□□ 2.63
SH2D4AQ9H788 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
SH2D4AQ9H788 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.46■■■□□ 2.63
SH2D4AQ9H788 MIR7108-201ENST00000614319 87 ntBASIC31.46■■■□□ 2.63
SH2D4AQ9H788 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SH2D4AQ9H788 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.46■■■□□ 2.63
SH2D4AQ9H788 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SH2D4AQ9H788 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.45■■■□□ 2.63
SH2D4AQ9H788 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SH2D4AQ9H788 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SH2D4AQ9H788 AC120057.4-201ENST00000624722 1615 ntBASIC31.42■■■□□ 2.62
SH2D4AQ9H788 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.42■■■□□ 2.62
SH2D4AQ9H788 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
SH2D4AQ9H788 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SH2D4AQ9H788 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SH2D4AQ9H788 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SH2D4AQ9H788 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
SH2D4AQ9H788 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.38■■■□□ 2.61
SH2D4AQ9H788 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.36■■■□□ 2.61
SH2D4AQ9H788 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC31.36■■■□□ 2.61
SH2D4AQ9H788 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms