Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC25.22■■□□□ 1.63
CDCP1Q9H5V8 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.22■■□□□ 1.63
CDCP1Q9H5V8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDCP1Q9H5V8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CDCP1Q9H5V8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.21■■□□□ 1.63
CDCP1Q9H5V8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CDCP1Q9H5V8 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.21■■□□□ 1.63
CDCP1Q9H5V8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.2■■□□□ 1.62
CDCP1Q9H5V8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CDCP1Q9H5V8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CDCP1Q9H5V8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDCP1Q9H5V8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CDCP1Q9H5V8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.17■■□□□ 1.62
CDCP1Q9H5V8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CDCP1Q9H5V8 AP006261.1-201ENST00000584783 668 ntBASIC25.17■■□□□ 1.62
CDCP1Q9H5V8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CDCP1Q9H5V8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
CDCP1Q9H5V8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.16■■□□□ 1.62
CDCP1Q9H5V8 AL162393.1-201ENST00000437852 946 ntBASIC25.16■■□□□ 1.62
CDCP1Q9H5V8 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CDCP1Q9H5V8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.16■■□□□ 1.62
CDCP1Q9H5V8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.15■■□□□ 1.62
CDCP1Q9H5V8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.15■■□□□ 1.62
CDCP1Q9H5V8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CDCP1Q9H5V8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDCP1Q9H5V8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CDCP1Q9H5V8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
CDCP1Q9H5V8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.13■■□□□ 1.61
CDCP1Q9H5V8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CDCP1Q9H5V8 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.13■■□□□ 1.61
CDCP1Q9H5V8 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CDCP1Q9H5V8 MIR762-201ENST00000390236 83 ntBASIC25.11■■□□□ 1.61
CDCP1Q9H5V8 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.11■■□□□ 1.61
CDCP1Q9H5V8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDCP1Q9H5V8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CDCP1Q9H5V8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDCP1Q9H5V8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CDCP1Q9H5V8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDCP1Q9H5V8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDCP1Q9H5V8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.07■■□□□ 1.6
CDCP1Q9H5V8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.07■■□□□ 1.6
CDCP1Q9H5V8 MIR3665-201ENST00000578708 105 ntBASIC25.07■■□□□ 1.6
CDCP1Q9H5V8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.06■■□□□ 1.6
CDCP1Q9H5V8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.06■■□□□ 1.6
CDCP1Q9H5V8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDCP1Q9H5V8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDCP1Q9H5V8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CDCP1Q9H5V8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.04■■□□□ 1.6
CDCP1Q9H5V8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CDCP1Q9H5V8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDCP1Q9H5V8 AC005559.1-201ENST00000589661 871 ntBASIC25.03■■□□□ 1.6
CDCP1Q9H5V8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDCP1Q9H5V8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CDCP1Q9H5V8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDCP1Q9H5V8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDCP1Q9H5V8 DUX4L28-201ENST00000623687 678 ntBASIC25.01■■□□□ 1.59
CDCP1Q9H5V8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CDCP1Q9H5V8 AC120057.4-201ENST00000624722 1615 ntBASIC24.97■■□□□ 1.59
CDCP1Q9H5V8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
CDCP1Q9H5V8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDCP1Q9H5V8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CDCP1Q9H5V8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDCP1Q9H5V8 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.95■■□□□ 1.59
CDCP1Q9H5V8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.95■■□□□ 1.58
CDCP1Q9H5V8 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CDCP1Q9H5V8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CDCP1Q9H5V8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.94■■□□□ 1.58
CDCP1Q9H5V8 AC087741.3-201ENST00000624270 1347 ntBASIC24.93■■□□□ 1.58
CDCP1Q9H5V8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CDCP1Q9H5V8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.92■■□□□ 1.58
CDCP1Q9H5V8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDCP1Q9H5V8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDCP1Q9H5V8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDCP1Q9H5V8 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.92■■□□□ 1.58
CDCP1Q9H5V8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CDCP1Q9H5V8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.91■■□□□ 1.58
CDCP1Q9H5V8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.9■■□□□ 1.58
CDCP1Q9H5V8 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CDCP1Q9H5V8 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDCP1Q9H5V8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.9■■□□□ 1.58
CDCP1Q9H5V8 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDCP1Q9H5V8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDCP1Q9H5V8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDCP1Q9H5V8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CDCP1Q9H5V8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.89■■□□□ 1.58
CDCP1Q9H5V8 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CDCP1Q9H5V8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDCP1Q9H5V8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
CDCP1Q9H5V8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CDCP1Q9H5V8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CDCP1Q9H5V8 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CDCP1Q9H5V8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.84■■□□□ 1.57
CDCP1Q9H5V8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
CDCP1Q9H5V8 AC044849.2-201ENST00000606596 710 ntBASIC24.84■■□□□ 1.57
CDCP1Q9H5V8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
CDCP1Q9H5V8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.83■■□□□ 1.57
CDCP1Q9H5V8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDCP1Q9H5V8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDCP1Q9H5V8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDCP1Q9H5V8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms