Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.39■□□□□ 0.21
CYSTM1Q9H1C7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.38■□□□□ 0.21
CYSTM1Q9H1C7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CYSTM1Q9H1C7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CYSTM1Q9H1C7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CYSTM1Q9H1C7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CYSTM1Q9H1C7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CYSTM1Q9H1C7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CYSTM1Q9H1C7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CYSTM1Q9H1C7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CYSTM1Q9H1C7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CYSTM1Q9H1C7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CYSTM1Q9H1C7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CYSTM1Q9H1C7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CYSTM1Q9H1C7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CYSTM1Q9H1C7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC16.33■□□□□ 0.2
CYSTM1Q9H1C7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC16.33■□□□□ 0.2
CYSTM1Q9H1C7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CYSTM1Q9H1C7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC16.32■□□□□ 0.2
CYSTM1Q9H1C7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.32■□□□□ 0.2
CYSTM1Q9H1C7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYSTM1Q9H1C7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CYSTM1Q9H1C7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC16.3■□□□□ 0.2
CYSTM1Q9H1C7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CYSTM1Q9H1C7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYSTM1Q9H1C7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.3■□□□□ 0.2
CYSTM1Q9H1C7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYSTM1Q9H1C7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYSTM1Q9H1C7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYSTM1Q9H1C7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYSTM1Q9H1C7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CYSTM1Q9H1C7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CYSTM1Q9H1C7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CYSTM1Q9H1C7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
CYSTM1Q9H1C7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CYSTM1Q9H1C7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CYSTM1Q9H1C7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CYSTM1Q9H1C7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CYSTM1Q9H1C7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CYSTM1Q9H1C7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CYSTM1Q9H1C7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CYSTM1Q9H1C7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CYSTM1Q9H1C7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CYSTM1Q9H1C7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CYSTM1Q9H1C7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CYSTM1Q9H1C7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CYSTM1Q9H1C7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CYSTM1Q9H1C7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CYSTM1Q9H1C7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CYSTM1Q9H1C7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CYSTM1Q9H1C7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CYSTM1Q9H1C7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CYSTM1Q9H1C7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CYSTM1Q9H1C7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CYSTM1Q9H1C7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYSTM1Q9H1C7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYSTM1Q9H1C7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYSTM1Q9H1C7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYSTM1Q9H1C7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CYSTM1Q9H1C7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CYSTM1Q9H1C7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CYSTM1Q9H1C7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CYSTM1Q9H1C7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CYSTM1Q9H1C7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYSTM1Q9H1C7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CYSTM1Q9H1C7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CYSTM1Q9H1C7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYSTM1Q9H1C7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CYSTM1Q9H1C7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYSTM1Q9H1C7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYSTM1Q9H1C7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.15■□□□□ 0.18
CYSTM1Q9H1C7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYSTM1Q9H1C7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CYSTM1Q9H1C7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYSTM1Q9H1C7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC16.14■□□□□ 0.17
CYSTM1Q9H1C7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.14■□□□□ 0.17
CYSTM1Q9H1C7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CYSTM1Q9H1C7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYSTM1Q9H1C7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYSTM1Q9H1C7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CYSTM1Q9H1C7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.11■□□□□ 0.17
CYSTM1Q9H1C7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CYSTM1Q9H1C7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYSTM1Q9H1C7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CYSTM1Q9H1C7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC16.1■□□□□ 0.17
CYSTM1Q9H1C7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CYSTM1Q9H1C7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CYSTM1Q9H1C7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.1■□□□□ 0.17
CYSTM1Q9H1C7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.09■□□□□ 0.17
CYSTM1Q9H1C7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CYSTM1Q9H1C7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYSTM1Q9H1C7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYSTM1Q9H1C7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CYSTM1Q9H1C7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CYSTM1Q9H1C7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CYSTM1Q9H1C7 AL121749.1-202ENST00000609313 2153 ntBASIC16.08■□□□□ 0.16
CYSTM1Q9H1C7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CYSTM1Q9H1C7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CYSTM1Q9H1C7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CYSTM1Q9H1C7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms