Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Rnaseh2aQ9CWY8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
Rnaseh2aQ9CWY8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC31.91■■■□□ 2.7
Rnaseh2aQ9CWY8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31.91■■■□□ 2.7
Rnaseh2aQ9CWY8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Rnaseh2aQ9CWY8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Rnaseh2aQ9CWY8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Rnaseh2aQ9CWY8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Rnaseh2aQ9CWY8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
Rnaseh2aQ9CWY8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC31.87■■■□□ 2.69
Rnaseh2aQ9CWY8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Rnaseh2aQ9CWY8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Rnaseh2aQ9CWY8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.85■■■□□ 2.69
Rnaseh2aQ9CWY8 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.85■■■□□ 2.69
Rnaseh2aQ9CWY8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Rnaseh2aQ9CWY8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Rnaseh2aQ9CWY8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Rnaseh2aQ9CWY8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Rnaseh2aQ9CWY8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Rnaseh2aQ9CWY8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Rnaseh2aQ9CWY8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.78■■■□□ 2.68
Rnaseh2aQ9CWY8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.77■■■□□ 2.68
Rnaseh2aQ9CWY8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.77■■■□□ 2.68
Rnaseh2aQ9CWY8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
Rnaseh2aQ9CWY8 Gm7432-201ENSMUST00000210343 879 ntBASIC31.75■■■□□ 2.67
Rnaseh2aQ9CWY8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Rnaseh2aQ9CWY8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Rnaseh2aQ9CWY8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Rnaseh2aQ9CWY8 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
Rnaseh2aQ9CWY8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Rnaseh2aQ9CWY8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
Rnaseh2aQ9CWY8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Rnaseh2aQ9CWY8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.67■■■□□ 2.66
Rnaseh2aQ9CWY8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.67■■■□□ 2.66
Rnaseh2aQ9CWY8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.66■■■□□ 2.66
Rnaseh2aQ9CWY8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Rnaseh2aQ9CWY8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Rnaseh2aQ9CWY8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Rnaseh2aQ9CWY8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.63■■■□□ 2.65
Rnaseh2aQ9CWY8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rnaseh2aQ9CWY8 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.61■■■□□ 2.65
Rnaseh2aQ9CWY8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rnaseh2aQ9CWY8 Mir6538-201ENSMUST00000183713 110 ntBASIC31.59■■■□□ 2.65
Rnaseh2aQ9CWY8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Rnaseh2aQ9CWY8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rnaseh2aQ9CWY8 Nkain2-201ENSMUST00000092602 558 ntBASIC31.56■■■□□ 2.64
Rnaseh2aQ9CWY8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
Rnaseh2aQ9CWY8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rnaseh2aQ9CWY8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
Rnaseh2aQ9CWY8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Rnaseh2aQ9CWY8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
Rnaseh2aQ9CWY8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Rnaseh2aQ9CWY8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
Rnaseh2aQ9CWY8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Rnaseh2aQ9CWY8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Rnaseh2aQ9CWY8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Rnaseh2aQ9CWY8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.46■■■□□ 2.63
Rnaseh2aQ9CWY8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.46■■■□□ 2.63
Rnaseh2aQ9CWY8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC31.45■■■□□ 2.63
Rnaseh2aQ9CWY8 Gm11599-201ENSMUST00000118720 878 ntBASIC31.44■■■□□ 2.62
Rnaseh2aQ9CWY8 Cap2-205ENSMUST00000225824 1634 ntBASIC31.44■■■□□ 2.62
Rnaseh2aQ9CWY8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Rnaseh2aQ9CWY8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC31.43■■■□□ 2.62
Rnaseh2aQ9CWY8 Gm11175-201ENSMUST00000116172 543 ntBASIC31.42■■■□□ 2.62
Rnaseh2aQ9CWY8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Rnaseh2aQ9CWY8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.39■■■□□ 2.62
Rnaseh2aQ9CWY8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Rnaseh2aQ9CWY8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Rnaseh2aQ9CWY8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Rnaseh2aQ9CWY8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Rnaseh2aQ9CWY8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
Rnaseh2aQ9CWY8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Rnaseh2aQ9CWY8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Rnaseh2aQ9CWY8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Rnaseh2aQ9CWY8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.33■■■□□ 2.61
Rnaseh2aQ9CWY8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rnaseh2aQ9CWY8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.28■■■□□ 2.6
Rnaseh2aQ9CWY8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rnaseh2aQ9CWY8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rnaseh2aQ9CWY8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC31.24■■■□□ 2.59
Rnaseh2aQ9CWY8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Rnaseh2aQ9CWY8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Rnaseh2aQ9CWY8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
Rnaseh2aQ9CWY8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC31.22■■■□□ 2.59
Rnaseh2aQ9CWY8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.21■■■□□ 2.59
Rnaseh2aQ9CWY8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Rnaseh2aQ9CWY8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Rnaseh2aQ9CWY8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
Rnaseh2aQ9CWY8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rnaseh2aQ9CWY8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Rnaseh2aQ9CWY8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
Rnaseh2aQ9CWY8 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rnaseh2aQ9CWY8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Rnaseh2aQ9CWY8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.13■■■□□ 2.57
Rnaseh2aQ9CWY8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Rnaseh2aQ9CWY8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.12■■■□□ 2.57
Rnaseh2aQ9CWY8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Rnaseh2aQ9CWY8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
Rnaseh2aQ9CWY8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rnaseh2aQ9CWY8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 122.2 ms