Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Nkx6-1Q99MA9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Nkx6-1Q99MA9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Nkx6-1Q99MA9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Nkx6-1Q99MA9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Nkx6-1Q99MA9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Nkx6-1Q99MA9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Nkx6-1Q99MA9 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.3■■□□□ 1.48
Nkx6-1Q99MA9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Nkx6-1Q99MA9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Nkx6-1Q99MA9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Nkx6-1Q99MA9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.27■■□□□ 1.48
Nkx6-1Q99MA9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Nkx6-1Q99MA9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Nkx6-1Q99MA9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Nkx6-1Q99MA9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Nkx6-1Q99MA9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
Nkx6-1Q99MA9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Nkx6-1Q99MA9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Nkx6-1Q99MA9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Nkx6-1Q99MA9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Nkx6-1Q99MA9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Nkx6-1Q99MA9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Nkx6-1Q99MA9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Nkx6-1Q99MA9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.16■■□□□ 1.46
Nkx6-1Q99MA9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.16■■□□□ 1.46
Nkx6-1Q99MA9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
Nkx6-1Q99MA9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Nkx6-1Q99MA9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Nkx6-1Q99MA9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.12■■□□□ 1.45
Nkx6-1Q99MA9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
Nkx6-1Q99MA9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.1■■□□□ 1.45
Nkx6-1Q99MA9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Nkx6-1Q99MA9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Nkx6-1Q99MA9 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.07■■□□□ 1.44
Nkx6-1Q99MA9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Nkx6-1Q99MA9 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.05■■□□□ 1.44
Nkx6-1Q99MA9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Nkx6-1Q99MA9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Nkx6-1Q99MA9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Nkx6-1Q99MA9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Nkx6-1Q99MA9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Nkx6-1Q99MA9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24■■□□□ 1.43
Nkx6-1Q99MA9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24■■□□□ 1.43
Nkx6-1Q99MA9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24■■□□□ 1.43
Nkx6-1Q99MA9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Nkx6-1Q99MA9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Nkx6-1Q99MA9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24■■□□□ 1.43
Nkx6-1Q99MA9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Nkx6-1Q99MA9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Nkx6-1Q99MA9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
Nkx6-1Q99MA9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Nkx6-1Q99MA9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Nkx6-1Q99MA9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.96■■□□□ 1.43
Nkx6-1Q99MA9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Nkx6-1Q99MA9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Nkx6-1Q99MA9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Nkx6-1Q99MA9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Nkx6-1Q99MA9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.95■■□□□ 1.42
Nkx6-1Q99MA9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Nkx6-1Q99MA9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.94■■□□□ 1.42
Nkx6-1Q99MA9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Nkx6-1Q99MA9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Nkx6-1Q99MA9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Nkx6-1Q99MA9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Nkx6-1Q99MA9 Nkain2-201ENSMUST00000092602 558 ntBASIC23.9■■□□□ 1.42
Nkx6-1Q99MA9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nkx6-1Q99MA9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.89■■□□□ 1.41
Nkx6-1Q99MA9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Nkx6-1Q99MA9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Nkx6-1Q99MA9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Nkx6-1Q99MA9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nkx6-1Q99MA9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nkx6-1Q99MA9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nkx6-1Q99MA9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nkx6-1Q99MA9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nkx6-1Q99MA9 Gm7432-201ENSMUST00000210343 879 ntBASIC23.85■■□□□ 1.41
Nkx6-1Q99MA9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.84■■□□□ 1.41
Nkx6-1Q99MA9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nkx6-1Q99MA9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.83■■□□□ 1.41
Nkx6-1Q99MA9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.83■■□□□ 1.41
Nkx6-1Q99MA9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
Nkx6-1Q99MA9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nkx6-1Q99MA9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.81■■□□□ 1.4
Nkx6-1Q99MA9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nkx6-1Q99MA9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.8■■□□□ 1.4
Nkx6-1Q99MA9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.8■■□□□ 1.4
Nkx6-1Q99MA9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nkx6-1Q99MA9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Nkx6-1Q99MA9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx6-1Q99MA9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nkx6-1Q99MA9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nkx6-1Q99MA9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nkx6-1Q99MA9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nkx6-1Q99MA9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
Nkx6-1Q99MA9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nkx6-1Q99MA9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nkx6-1Q99MA9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Nkx6-1Q99MA9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Nkx6-1Q99MA9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms