Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
FOXC2Q99958 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
FOXC2Q99958 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FOXC2Q99958 DUX4L29-201ENST00000425409 679 ntBASIC23.35■■□□□ 1.33
FOXC2Q99958 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.34■■□□□ 1.33
FOXC2Q99958 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
FOXC2Q99958 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
FOXC2Q99958 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXC2Q99958 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXC2Q99958 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.32■■□□□ 1.32
FOXC2Q99958 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.3■■□□□ 1.32
FOXC2Q99958 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.29■■□□□ 1.32
FOXC2Q99958 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.29■■□□□ 1.32
FOXC2Q99958 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXC2Q99958 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXC2Q99958 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXC2Q99958 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXC2Q99958 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.27■■□□□ 1.32
FOXC2Q99958 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.26■■□□□ 1.31
FOXC2Q99958 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXC2Q99958 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXC2Q99958 HSD17B1P1-201ENST00000590052 955 ntBASIC23.25■■□□□ 1.31
FOXC2Q99958 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FOXC2Q99958 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.23■■□□□ 1.31
FOXC2Q99958 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
FOXC2Q99958 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
FOXC2Q99958 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FOXC2Q99958 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.18■■□□□ 1.3
FOXC2Q99958 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXC2Q99958 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.17■■□□□ 1.3
FOXC2Q99958 AC021231.2-201ENST00000594613 730 ntBASIC23.17■■□□□ 1.3
FOXC2Q99958 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.17■■□□□ 1.3
FOXC2Q99958 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
FOXC2Q99958 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
FOXC2Q99958 MIR3648-2-201ENST00000581792 180 ntBASIC23.16■■□□□ 1.3
FOXC2Q99958 MIR3648-1-201ENST00000615959 180 ntBASIC23.16■■□□□ 1.3
FOXC2Q99958 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.16■■□□□ 1.3
FOXC2Q99958 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXC2Q99958 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXC2Q99958 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.15■■□□□ 1.3
FOXC2Q99958 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FOXC2Q99958 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.15■■□□□ 1.3
FOXC2Q99958 WASH5P-204ENST00000632292 975 ntBASIC23.15■■□□□ 1.3
FOXC2Q99958 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
FOXC2Q99958 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.14■■□□□ 1.29
FOXC2Q99958 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.13■■□□□ 1.29
FOXC2Q99958 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
FOXC2Q99958 AC016575.1-201ENST00000607026 382 ntBASIC23.13■■□□□ 1.29
FOXC2Q99958 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.13■■□□□ 1.29
FOXC2Q99958 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXC2Q99958 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
FOXC2Q99958 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.12■■□□□ 1.29
FOXC2Q99958 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC23.11■■□□□ 1.29
FOXC2Q99958 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXC2Q99958 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.1■■□□□ 1.29
FOXC2Q99958 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.1■■□□□ 1.29
FOXC2Q99958 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.09■■□□□ 1.29
FOXC2Q99958 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.09■■□□□ 1.29
FOXC2Q99958 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
FOXC2Q99958 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXC2Q99958 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.07■■□□□ 1.28
FOXC2Q99958 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
FOXC2Q99958 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
FOXC2Q99958 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
FOXC2Q99958 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.02■■□□□ 1.28
FOXC2Q99958 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.02■■□□□ 1.28
FOXC2Q99958 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXC2Q99958 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXC2Q99958 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
FOXC2Q99958 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23■■□□□ 1.27
FOXC2Q99958 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.99■■□□□ 1.27
FOXC2Q99958 DUX4L11-201ENST00000611504 1267 ntBASIC22.99■■□□□ 1.27
FOXC2Q99958 DUX4L12-201ENST00000614593 1267 ntBASIC22.99■■□□□ 1.27
FOXC2Q99958 LINC01971-201ENST00000617888 1048 ntBASIC22.99■■□□□ 1.27
FOXC2Q99958 DUX4L14-201ENST00000621227 1267 ntBASIC22.99■■□□□ 1.27
FOXC2Q99958 CR559946.2-201ENST00000623684 991 ntBASIC22.99■■□□□ 1.27
FOXC2Q99958 AC108673.1-201ENST00000510422 1159 ntBASIC22.98■■□□□ 1.27
FOXC2Q99958 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
FOXC2Q99958 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
FOXC2Q99958 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
FOXC2Q99958 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXC2Q99958 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.97■■□□□ 1.27
FOXC2Q99958 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.97■■□□□ 1.27
FOXC2Q99958 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXC2Q99958 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
FOXC2Q99958 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXC2Q99958 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
FOXC2Q99958 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
FOXC2Q99958 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
FOXC2Q99958 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
FOXC2Q99958 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.94■■□□□ 1.26
FOXC2Q99958 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
FOXC2Q99958 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
FOXC2Q99958 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXC2Q99958 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
FOXC2Q99958 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
FOXC2Q99958 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
FOXC2Q99958 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.92■■□□□ 1.26
FOXC2Q99958 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FOXC2Q99958 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms