Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
AP1S3Q96PC3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC20.34■□□□□ 0.85
AP1S3Q96PC3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S3Q96PC3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
AP1S3Q96PC3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
AP1S3Q96PC3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP1S3Q96PC3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.32■□□□□ 0.84
AP1S3Q96PC3 AC015813.7-201ENST00000623294 581 ntBASIC20.32■□□□□ 0.84
AP1S3Q96PC3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S3Q96PC3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP1S3Q96PC3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.3■□□□□ 0.84
AP1S3Q96PC3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AP1S3Q96PC3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP1S3Q96PC3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S3Q96PC3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S3Q96PC3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S3Q96PC3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S3Q96PC3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S3Q96PC3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S3Q96PC3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S3Q96PC3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
AP1S3Q96PC3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S3Q96PC3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
AP1S3Q96PC3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S3Q96PC3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S3Q96PC3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S3Q96PC3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S3Q96PC3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S3Q96PC3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S3Q96PC3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S3Q96PC3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S3Q96PC3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S3Q96PC3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S3Q96PC3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S3Q96PC3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S3Q96PC3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S3Q96PC3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.18■□□□□ 0.82
AP1S3Q96PC3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S3Q96PC3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.18■□□□□ 0.82
AP1S3Q96PC3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S3Q96PC3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
AP1S3Q96PC3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
AP1S3Q96PC3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
AP1S3Q96PC3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.16■□□□□ 0.82
AP1S3Q96PC3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S3Q96PC3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP1S3Q96PC3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
AP1S3Q96PC3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
AP1S3Q96PC3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP1S3Q96PC3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP1S3Q96PC3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP1S3Q96PC3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.13■□□□□ 0.81
AP1S3Q96PC3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP1S3Q96PC3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
AP1S3Q96PC3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP1S3Q96PC3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP1S3Q96PC3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP1S3Q96PC3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
AP1S3Q96PC3 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP1S3Q96PC3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP1S3Q96PC3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.09■□□□□ 0.81
AP1S3Q96PC3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.08■□□□□ 0.81
AP1S3Q96PC3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP1S3Q96PC3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.07■□□□□ 0.8
AP1S3Q96PC3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
AP1S3Q96PC3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S3Q96PC3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S3Q96PC3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
AP1S3Q96PC3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S3Q96PC3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
AP1S3Q96PC3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S3Q96PC3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S3Q96PC3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.04■□□□□ 0.8
AP1S3Q96PC3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
AP1S3Q96PC3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.03■□□□□ 0.8
AP1S3Q96PC3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S3Q96PC3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S3Q96PC3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S3Q96PC3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S3Q96PC3 AC120057.4-201ENST00000624722 1615 ntBASIC20.01■□□□□ 0.79
AP1S3Q96PC3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP1S3Q96PC3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20■□□□□ 0.79
AP1S3Q96PC3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20■□□□□ 0.79
AP1S3Q96PC3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20■□□□□ 0.79
AP1S3Q96PC3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.99■□□□□ 0.79
AP1S3Q96PC3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S3Q96PC3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S3Q96PC3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S3Q96PC3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP1S3Q96PC3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
AP1S3Q96PC3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S3Q96PC3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
AP1S3Q96PC3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S3Q96PC3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP1S3Q96PC3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP1S3Q96PC3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.95■□□□□ 0.78
AP1S3Q96PC3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP1S3Q96PC3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP1S3Q96PC3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP1S3Q96PC3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 291.6 ms