Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.59■■■□□ 2.33
CASD1Q96PB1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CASD1Q96PB1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CASD1Q96PB1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.57■■■□□ 2.32
CASD1Q96PB1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
CASD1Q96PB1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.55■■■□□ 2.32
CASD1Q96PB1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CASD1Q96PB1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CASD1Q96PB1 MIR7108-201ENST00000614319 87 ntBASIC29.52■■■□□ 2.32
CASD1Q96PB1 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.51■■■□□ 2.32
CASD1Q96PB1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CASD1Q96PB1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.49■■■□□ 2.31
CASD1Q96PB1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
CASD1Q96PB1 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CASD1Q96PB1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CASD1Q96PB1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC29.44■■■□□ 2.3
CASD1Q96PB1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.44■■■□□ 2.3
CASD1Q96PB1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
CASD1Q96PB1 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CASD1Q96PB1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CASD1Q96PB1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
CASD1Q96PB1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.43■■■□□ 2.3
CASD1Q96PB1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CASD1Q96PB1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
CASD1Q96PB1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.42■■■□□ 2.3
CASD1Q96PB1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
CASD1Q96PB1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CASD1Q96PB1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.4■■■□□ 2.3
CASD1Q96PB1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CASD1Q96PB1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CASD1Q96PB1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CASD1Q96PB1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CASD1Q96PB1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.38■■■□□ 2.29
CASD1Q96PB1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CASD1Q96PB1 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC29.37■■■□□ 2.29
CASD1Q96PB1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.36■■■□□ 2.29
CASD1Q96PB1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CASD1Q96PB1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.36■■■□□ 2.29
CASD1Q96PB1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CASD1Q96PB1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
CASD1Q96PB1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.34■■■□□ 2.29
CASD1Q96PB1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.34■■■□□ 2.29
CASD1Q96PB1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.34■■■□□ 2.29
CASD1Q96PB1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CASD1Q96PB1 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CASD1Q96PB1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CASD1Q96PB1 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
CASD1Q96PB1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.32■■■□□ 2.28
CASD1Q96PB1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.32■■■□□ 2.28
CASD1Q96PB1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CASD1Q96PB1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CASD1Q96PB1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CASD1Q96PB1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CASD1Q96PB1 ZNRF2P2-203ENST00000454624 420 ntBASIC29.3■■■□□ 2.28
CASD1Q96PB1 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CASD1Q96PB1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.29■■■□□ 2.28
CASD1Q96PB1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CASD1Q96PB1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.28■■■□□ 2.28
CASD1Q96PB1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.27■■■□□ 2.28
CASD1Q96PB1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
CASD1Q96PB1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CASD1Q96PB1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC29.26■■■□□ 2.27
CASD1Q96PB1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.25■■■□□ 2.27
CASD1Q96PB1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CASD1Q96PB1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.24■■■□□ 2.27
CASD1Q96PB1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.24■■■□□ 2.27
CASD1Q96PB1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CASD1Q96PB1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.23■■■□□ 2.27
CASD1Q96PB1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CASD1Q96PB1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
CASD1Q96PB1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CASD1Q96PB1 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CASD1Q96PB1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CASD1Q96PB1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC29.2■■■□□ 2.26
CASD1Q96PB1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.2■■■□□ 2.26
CASD1Q96PB1 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.19■■■□□ 2.26
CASD1Q96PB1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.19■■■□□ 2.26
CASD1Q96PB1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.18■■■□□ 2.26
CASD1Q96PB1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CASD1Q96PB1 HLA-V-202ENST00000446817 847 ntBASIC29.17■■■□□ 2.26
CASD1Q96PB1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.17■■■□□ 2.26
CASD1Q96PB1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.17■■■□□ 2.26
CASD1Q96PB1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CASD1Q96PB1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CASD1Q96PB1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CASD1Q96PB1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.15■■■□□ 2.26
CASD1Q96PB1 DUX4L29-201ENST00000425409 679 ntBASIC29.15■■■□□ 2.26
CASD1Q96PB1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CASD1Q96PB1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
CASD1Q96PB1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.14■■■□□ 2.25
CASD1Q96PB1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.13■■■□□ 2.25
CASD1Q96PB1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
CASD1Q96PB1 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CASD1Q96PB1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CASD1Q96PB1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CASD1Q96PB1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CASD1Q96PB1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.11■■■□□ 2.25
CASD1Q96PB1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CASD1Q96PB1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CASD1Q96PB1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 337.6 ms