Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF183Q96D59 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF183Q96D59 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF183Q96D59 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF183Q96D59 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF183Q96D59 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF183Q96D59 WASH5P-204ENST00000632292 975 ntBASIC19.86■□□□□ 0.77
RNF183Q96D59 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RNF183Q96D59 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF183Q96D59 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF183Q96D59 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF183Q96D59 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF183Q96D59 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF183Q96D59 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF183Q96D59 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF183Q96D59 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RNF183Q96D59 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF183Q96D59 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF183Q96D59 AL162393.1-201ENST00000437852 946 ntBASIC19.82■□□□□ 0.76
RNF183Q96D59 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF183Q96D59 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF183Q96D59 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF183Q96D59 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF183Q96D59 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF183Q96D59 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.8■□□□□ 0.76
RNF183Q96D59 MIR3665-201ENST00000578708 105 ntBASIC19.8■□□□□ 0.76
RNF183Q96D59 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF183Q96D59 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF183Q96D59 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.8■□□□□ 0.76
RNF183Q96D59 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
RNF183Q96D59 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF183Q96D59 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF183Q96D59 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF183Q96D59 MIR762-201ENST00000390236 83 ntBASIC19.78■□□□□ 0.76
RNF183Q96D59 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF183Q96D59 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF183Q96D59 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF183Q96D59 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF183Q96D59 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
RNF183Q96D59 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF183Q96D59 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF183Q96D59 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF183Q96D59 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF183Q96D59 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF183Q96D59 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF183Q96D59 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF183Q96D59 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF183Q96D59 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF183Q96D59 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF183Q96D59 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF183Q96D59 AC005559.1-201ENST00000589661 871 ntBASIC19.72■□□□□ 0.75
RNF183Q96D59 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF183Q96D59 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF183Q96D59 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF183Q96D59 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF183Q96D59 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF183Q96D59 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF183Q96D59 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF183Q96D59 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF183Q96D59 DUX4L28-201ENST00000623687 678 ntBASIC19.69■□□□□ 0.74
RNF183Q96D59 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF183Q96D59 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF183Q96D59 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF183Q96D59 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF183Q96D59 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RNF183Q96D59 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF183Q96D59 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF183Q96D59 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RNF183Q96D59 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF183Q96D59 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RNF183Q96D59 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF183Q96D59 AC087741.3-201ENST00000624270 1347 ntBASIC19.65■□□□□ 0.74
RNF183Q96D59 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
RNF183Q96D59 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF183Q96D59 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF183Q96D59 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF183Q96D59 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF183Q96D59 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF183Q96D59 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF183Q96D59 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF183Q96D59 AC044849.2-201ENST00000606596 710 ntBASIC19.61■□□□□ 0.73
RNF183Q96D59 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF183Q96D59 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF183Q96D59 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF183Q96D59 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF183Q96D59 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RNF183Q96D59 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF183Q96D59 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
RNF183Q96D59 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF183Q96D59 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF183Q96D59 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
RNF183Q96D59 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF183Q96D59 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF183Q96D59 AC120057.4-201ENST00000624722 1615 ntBASIC19.57■□□□□ 0.72
RNF183Q96D59 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF183Q96D59 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RNF183Q96D59 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF183Q96D59 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF183Q96D59 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF183Q96D59 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms