Protein–RNA interactions for Protein: Q96AT9

RPE, Ribulose-phosphate 3-epimerase, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPEQ96AT9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
RPEQ96AT9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RPEQ96AT9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RPEQ96AT9 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RPEQ96AT9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RPEQ96AT9 AC097358.2-201ENST00000607541 1159 ntBASIC22.03■■□□□ 1.12
RPEQ96AT9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RPEQ96AT9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
RPEQ96AT9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RPEQ96AT9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC22■■□□□ 1.11
RPEQ96AT9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RPEQ96AT9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
RPEQ96AT9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.99■■□□□ 1.11
RPEQ96AT9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPEQ96AT9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPEQ96AT9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RPEQ96AT9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RPEQ96AT9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPEQ96AT9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
RPEQ96AT9 WASH5P-204ENST00000632292 975 ntBASIC21.96■■□□□ 1.11
RPEQ96AT9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPEQ96AT9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPEQ96AT9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.95■■□□□ 1.1
RPEQ96AT9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPEQ96AT9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RPEQ96AT9 AC136428.2-201ENST00000563187 214 ntBASIC21.95■■□□□ 1.1
RPEQ96AT9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPEQ96AT9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RPEQ96AT9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPEQ96AT9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RPEQ96AT9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RPEQ96AT9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPEQ96AT9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RPEQ96AT9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RPEQ96AT9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.91■■□□□ 1.1
RPEQ96AT9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.91■■□□□ 1.1
RPEQ96AT9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.9■■□□□ 1.1
RPEQ96AT9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RPEQ96AT9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.89■■□□□ 1.1
RPEQ96AT9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RPEQ96AT9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RPEQ96AT9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
RPEQ96AT9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.87■■□□□ 1.09
RPEQ96AT9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.87■■□□□ 1.09
RPEQ96AT9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.86■■□□□ 1.09
RPEQ96AT9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPEQ96AT9 AL391121.1-201ENST00000607967 1349 ntBASIC21.85■■□□□ 1.09
RPEQ96AT9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPEQ96AT9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPEQ96AT9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.84■■□□□ 1.09
RPEQ96AT9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.84■■□□□ 1.09
RPEQ96AT9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.84■■□□□ 1.09
RPEQ96AT9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.83■■□□□ 1.09
RPEQ96AT9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RPEQ96AT9 CAHM-201ENST00000604200 896 ntBASIC21.82■■□□□ 1.08
RPEQ96AT9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.82■■□□□ 1.08
RPEQ96AT9 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RPEQ96AT9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
RPEQ96AT9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPEQ96AT9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPEQ96AT9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPEQ96AT9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.8■■□□□ 1.08
RPEQ96AT9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPEQ96AT9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RPEQ96AT9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPEQ96AT9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPEQ96AT9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.79■■□□□ 1.08
RPEQ96AT9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPEQ96AT9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.77■■□□□ 1.08
RPEQ96AT9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RPEQ96AT9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.76■■□□□ 1.07
RPEQ96AT9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPEQ96AT9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPEQ96AT9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPEQ96AT9 AL161658.1-201ENST00000623641 1967 ntBASIC21.76■■□□□ 1.07
RPEQ96AT9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPEQ96AT9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RPEQ96AT9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPEQ96AT9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.74■■□□□ 1.07
RPEQ96AT9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.74■■□□□ 1.07
RPEQ96AT9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.74■■□□□ 1.07
RPEQ96AT9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.74■■□□□ 1.07
RPEQ96AT9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPEQ96AT9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPEQ96AT9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.73■■□□□ 1.07
RPEQ96AT9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPEQ96AT9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPEQ96AT9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPEQ96AT9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPEQ96AT9 SUZ12P1-203ENST00000578195 985 ntBASIC21.7■■□□□ 1.06
RPEQ96AT9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPEQ96AT9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPEQ96AT9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RPEQ96AT9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RPEQ96AT9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPEQ96AT9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RPEQ96AT9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPEQ96AT9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPEQ96AT9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPEQ96AT9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms