Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Chmp1aQ921W0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chmp1aQ921W0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
Chmp1aQ921W0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Chmp1aQ921W0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chmp1aQ921W0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chmp1aQ921W0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chmp1aQ921W0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chmp1aQ921W0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Chmp1aQ921W0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Chmp1aQ921W0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chmp1aQ921W0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp1aQ921W0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chmp1aQ921W0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chmp1aQ921W0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Chmp1aQ921W0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp1aQ921W0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Chmp1aQ921W0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Chmp1aQ921W0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Chmp1aQ921W0 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.95■■□□□ 1.1
Chmp1aQ921W0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp1aQ921W0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Chmp1aQ921W0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp1aQ921W0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Chmp1aQ921W0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Chmp1aQ921W0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Chmp1aQ921W0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Chmp1aQ921W0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Chmp1aQ921W0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Chmp1aQ921W0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Chmp1aQ921W0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Chmp1aQ921W0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp1aQ921W0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Chmp1aQ921W0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Chmp1aQ921W0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.85■■□□□ 1.09
Chmp1aQ921W0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.85■■□□□ 1.09
Chmp1aQ921W0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Chmp1aQ921W0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp1aQ921W0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Chmp1aQ921W0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Chmp1aQ921W0 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.84■■□□□ 1.09
Chmp1aQ921W0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.83■■□□□ 1.09
Chmp1aQ921W0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Chmp1aQ921W0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Chmp1aQ921W0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Chmp1aQ921W0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Chmp1aQ921W0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.82■■□□□ 1.08
Chmp1aQ921W0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Chmp1aQ921W0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp1aQ921W0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Chmp1aQ921W0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.8■■□□□ 1.08
Chmp1aQ921W0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp1aQ921W0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Chmp1aQ921W0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp1aQ921W0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Chmp1aQ921W0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp1aQ921W0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp1aQ921W0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Chmp1aQ921W0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.76■■□□□ 1.07
Chmp1aQ921W0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Chmp1aQ921W0 Gm25262-201ENSMUST00000174934 133 ntBASIC21.75■■□□□ 1.07
Chmp1aQ921W0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Chmp1aQ921W0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Chmp1aQ921W0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.74■■□□□ 1.07
Chmp1aQ921W0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Chmp1aQ921W0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp1aQ921W0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp1aQ921W0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Chmp1aQ921W0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp1aQ921W0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Chmp1aQ921W0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.72■■□□□ 1.07
Chmp1aQ921W0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp1aQ921W0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Chmp1aQ921W0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp1aQ921W0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Chmp1aQ921W0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
Chmp1aQ921W0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.71■■□□□ 1.07
Chmp1aQ921W0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Chmp1aQ921W0 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.7■■□□□ 1.06
Chmp1aQ921W0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chmp1aQ921W0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp1aQ921W0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp1aQ921W0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp1aQ921W0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chmp1aQ921W0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chmp1aQ921W0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chmp1aQ921W0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Chmp1aQ921W0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
Chmp1aQ921W0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Chmp1aQ921W0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.65■■□□□ 1.06
Chmp1aQ921W0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Chmp1aQ921W0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Chmp1aQ921W0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Chmp1aQ921W0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Chmp1aQ921W0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp1aQ921W0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp1aQ921W0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chmp1aQ921W0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Chmp1aQ921W0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chmp1aQ921W0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms