Protein–RNA interactions for Protein: Q8WW62

TMED6, Transmembrane emp24 domain-containing protein 6, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMED6Q8WW62 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMED6Q8WW62 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMED6Q8WW62 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
TMED6Q8WW62 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.18■■□□□ 1.14
TMED6Q8WW62 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TMED6Q8WW62 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMED6Q8WW62 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMED6Q8WW62 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
TMED6Q8WW62 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
TMED6Q8WW62 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TMED6Q8WW62 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TMED6Q8WW62 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TMED6Q8WW62 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TMED6Q8WW62 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TMED6Q8WW62 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TMED6Q8WW62 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
TMED6Q8WW62 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TMED6Q8WW62 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.12■■□□□ 1.13
TMED6Q8WW62 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
TMED6Q8WW62 AC120057.4-201ENST00000624722 1615 ntBASIC22.11■■□□□ 1.13
TMED6Q8WW62 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TMED6Q8WW62 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC22.1■■□□□ 1.13
TMED6Q8WW62 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TMED6Q8WW62 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TMED6Q8WW62 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TMED6Q8WW62 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC22.08■■□□□ 1.13
TMED6Q8WW62 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMED6Q8WW62 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TMED6Q8WW62 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.06■■□□□ 1.12
TMED6Q8WW62 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMED6Q8WW62 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMED6Q8WW62 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TMED6Q8WW62 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMED6Q8WW62 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.03■■□□□ 1.12
TMED6Q8WW62 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
TMED6Q8WW62 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.03■■□□□ 1.12
TMED6Q8WW62 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TMED6Q8WW62 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TMED6Q8WW62 AC135731.1-201ENST00000569415 2548 ntBASIC22.01■■□□□ 1.11
TMED6Q8WW62 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
TMED6Q8WW62 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22■■□□□ 1.11
TMED6Q8WW62 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TMED6Q8WW62 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TMED6Q8WW62 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22■■□□□ 1.11
TMED6Q8WW62 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22■■□□□ 1.11
TMED6Q8WW62 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TMED6Q8WW62 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.97■■□□□ 1.11
TMED6Q8WW62 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.96■■□□□ 1.11
TMED6Q8WW62 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TMED6Q8WW62 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.95■■□□□ 1.1
TMED6Q8WW62 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TMED6Q8WW62 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TMED6Q8WW62 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TMED6Q8WW62 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.92■■□□□ 1.1
TMED6Q8WW62 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.92■■□□□ 1.1
TMED6Q8WW62 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TMED6Q8WW62 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TMED6Q8WW62 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.91■■□□□ 1.1
TMED6Q8WW62 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TMED6Q8WW62 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
TMED6Q8WW62 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TMED6Q8WW62 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
TMED6Q8WW62 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
TMED6Q8WW62 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TMED6Q8WW62 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.89■■□□□ 1.09
TMED6Q8WW62 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TMED6Q8WW62 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.88■■□□□ 1.09
TMED6Q8WW62 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMED6Q8WW62 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TMED6Q8WW62 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TMED6Q8WW62 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TMED6Q8WW62 AC142086.6-201ENST00000621154 1765 ntBASIC21.87■■□□□ 1.09
TMED6Q8WW62 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TMED6Q8WW62 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMED6Q8WW62 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TMED6Q8WW62 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
TMED6Q8WW62 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.85■■□□□ 1.09
TMED6Q8WW62 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMED6Q8WW62 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TMED6Q8WW62 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TMED6Q8WW62 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TMED6Q8WW62 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TMED6Q8WW62 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TMED6Q8WW62 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.83■■□□□ 1.09
TMED6Q8WW62 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TMED6Q8WW62 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMED6Q8WW62 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TMED6Q8WW62 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.81■■□□□ 1.08
TMED6Q8WW62 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
TMED6Q8WW62 ST7-AS1-201ENST00000456775 1889 ntBASIC21.81■■□□□ 1.08
TMED6Q8WW62 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TMED6Q8WW62 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TMED6Q8WW62 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TMED6Q8WW62 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.79■■□□□ 1.08
TMED6Q8WW62 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.79■■□□□ 1.08
TMED6Q8WW62 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TMED6Q8WW62 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMED6Q8WW62 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMED6Q8WW62 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMED6Q8WW62 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms