Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CT55Q8WUE5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CT55Q8WUE5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.68■■□□□ 1.7
CT55Q8WUE5 ABHD17AP4-201ENST00000411545 909 ntBASIC25.68■■□□□ 1.7
CT55Q8WUE5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC25.68■■□□□ 1.7
CT55Q8WUE5 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CT55Q8WUE5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CT55Q8WUE5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CT55Q8WUE5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CT55Q8WUE5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.65■■□□□ 1.7
CT55Q8WUE5 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CT55Q8WUE5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CT55Q8WUE5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CT55Q8WUE5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CT55Q8WUE5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CT55Q8WUE5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CT55Q8WUE5 MIR7108-201ENST00000614319 87 ntBASIC25.62■■□□□ 1.69
CT55Q8WUE5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
CT55Q8WUE5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.6■■□□□ 1.69
CT55Q8WUE5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CT55Q8WUE5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.58■■□□□ 1.69
CT55Q8WUE5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CT55Q8WUE5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.57■■□□□ 1.68
CT55Q8WUE5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CT55Q8WUE5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CT55Q8WUE5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CT55Q8WUE5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.56■■□□□ 1.68
CT55Q8WUE5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CT55Q8WUE5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CT55Q8WUE5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CT55Q8WUE5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.54■■□□□ 1.68
CT55Q8WUE5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.54■■□□□ 1.68
CT55Q8WUE5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
CT55Q8WUE5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CT55Q8WUE5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.53■■□□□ 1.68
CT55Q8WUE5 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CT55Q8WUE5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.53■■□□□ 1.68
CT55Q8WUE5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CT55Q8WUE5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CT55Q8WUE5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CT55Q8WUE5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.53■■□□□ 1.68
CT55Q8WUE5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CT55Q8WUE5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.52■■□□□ 1.68
CT55Q8WUE5 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CT55Q8WUE5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CT55Q8WUE5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CT55Q8WUE5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CT55Q8WUE5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CT55Q8WUE5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.49■■□□□ 1.67
CT55Q8WUE5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.49■■□□□ 1.67
CT55Q8WUE5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.49■■□□□ 1.67
CT55Q8WUE5 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
CT55Q8WUE5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.47■■□□□ 1.67
CT55Q8WUE5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CT55Q8WUE5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.47■■□□□ 1.67
CT55Q8WUE5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CT55Q8WUE5 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CT55Q8WUE5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CT55Q8WUE5 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CT55Q8WUE5 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CT55Q8WUE5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.44■■□□□ 1.66
CT55Q8WUE5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CT55Q8WUE5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CT55Q8WUE5 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.43■■□□□ 1.66
CT55Q8WUE5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.43■■□□□ 1.66
CT55Q8WUE5 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.42■■□□□ 1.66
CT55Q8WUE5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CT55Q8WUE5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CT55Q8WUE5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.41■■□□□ 1.66
CT55Q8WUE5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.41■■□□□ 1.66
CT55Q8WUE5 ZNRF2P2-203ENST00000454624 420 ntBASIC25.41■■□□□ 1.66
CT55Q8WUE5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CT55Q8WUE5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CT55Q8WUE5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.4■■□□□ 1.66
CT55Q8WUE5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CT55Q8WUE5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CT55Q8WUE5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.38■■□□□ 1.65
CT55Q8WUE5 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CT55Q8WUE5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.37■■□□□ 1.65
CT55Q8WUE5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CT55Q8WUE5 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CT55Q8WUE5 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CT55Q8WUE5 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CT55Q8WUE5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CT55Q8WUE5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CT55Q8WUE5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CT55Q8WUE5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.35■■□□□ 1.65
CT55Q8WUE5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.34■■□□□ 1.65
CT55Q8WUE5 HLA-V-202ENST00000446817 847 ntBASIC25.34■■□□□ 1.65
CT55Q8WUE5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.34■■□□□ 1.65
CT55Q8WUE5 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
CT55Q8WUE5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.32■■□□□ 1.64
CT55Q8WUE5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.32■■□□□ 1.64
CT55Q8WUE5 DUX4L29-201ENST00000425409 679 ntBASIC25.32■■□□□ 1.64
CT55Q8WUE5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.32■■□□□ 1.64
CT55Q8WUE5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CT55Q8WUE5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CT55Q8WUE5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.31■■□□□ 1.64
CT55Q8WUE5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CT55Q8WUE5 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms