Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCC2Q8TAQ2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
SMARCC2Q8TAQ2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.93■■■□□ 2.7
SMARCC2Q8TAQ2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.93■■■□□ 2.7
SMARCC2Q8TAQ2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
SMARCC2Q8TAQ2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
SMARCC2Q8TAQ2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.9■■■□□ 2.7
SMARCC2Q8TAQ2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SMARCC2Q8TAQ2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.89■■■□□ 2.7
SMARCC2Q8TAQ2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
SMARCC2Q8TAQ2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SMARCC2Q8TAQ2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SMARCC2Q8TAQ2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
SMARCC2Q8TAQ2 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
SMARCC2Q8TAQ2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.86■■■□□ 2.69
SMARCC2Q8TAQ2 AC097358.2-201ENST00000607541 1159 ntBASIC31.86■■■□□ 2.69
SMARCC2Q8TAQ2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
SMARCC2Q8TAQ2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.86■■■□□ 2.69
SMARCC2Q8TAQ2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.85■■■□□ 2.69
SMARCC2Q8TAQ2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
SMARCC2Q8TAQ2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.84■■■□□ 2.69
SMARCC2Q8TAQ2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMARCC2Q8TAQ2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
SMARCC2Q8TAQ2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCC2Q8TAQ2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SMARCC2Q8TAQ2 AC136428.2-201ENST00000563187 214 ntBASIC31.78■■■□□ 2.68
SMARCC2Q8TAQ2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCC2Q8TAQ2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCC2Q8TAQ2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCC2Q8TAQ2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.77■■■□□ 2.68
SMARCC2Q8TAQ2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.68
SMARCC2Q8TAQ2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMARCC2Q8TAQ2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.74■■■□□ 2.67
SMARCC2Q8TAQ2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.73■■■□□ 2.67
SMARCC2Q8TAQ2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.72■■■□□ 2.67
SMARCC2Q8TAQ2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SMARCC2Q8TAQ2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
SMARCC2Q8TAQ2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SMARCC2Q8TAQ2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SMARCC2Q8TAQ2 AL133380.1-201ENST00000506013 324 ntBASIC31.69■■■□□ 2.66
SMARCC2Q8TAQ2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SMARCC2Q8TAQ2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SMARCC2Q8TAQ2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.67■■■□□ 2.66
SMARCC2Q8TAQ2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCC2Q8TAQ2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.64■■■□□ 2.66
SMARCC2Q8TAQ2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.62■■■□□ 2.65
SMARCC2Q8TAQ2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.62■■■□□ 2.65
SMARCC2Q8TAQ2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.61■■■□□ 2.65
SMARCC2Q8TAQ2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.6■■■□□ 2.65
SMARCC2Q8TAQ2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SMARCC2Q8TAQ2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.58■■■□□ 2.65
SMARCC2Q8TAQ2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.58■■■□□ 2.65
SMARCC2Q8TAQ2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SMARCC2Q8TAQ2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCC2Q8TAQ2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.56■■■□□ 2.64
SMARCC2Q8TAQ2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.56■■■□□ 2.64
SMARCC2Q8TAQ2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.54■■■□□ 2.64
SMARCC2Q8TAQ2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SMARCC2Q8TAQ2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.54■■■□□ 2.64
SMARCC2Q8TAQ2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
SMARCC2Q8TAQ2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SMARCC2Q8TAQ2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
SMARCC2Q8TAQ2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SMARCC2Q8TAQ2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCC2Q8TAQ2 SUZ12P1-203ENST00000578195 985 ntBASIC31.49■■■□□ 2.63
SMARCC2Q8TAQ2 CAHM-201ENST00000604200 896 ntBASIC31.49■■■□□ 2.63
SMARCC2Q8TAQ2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.47■■■□□ 2.63
SMARCC2Q8TAQ2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.47■■■□□ 2.63
SMARCC2Q8TAQ2 ABCB10P1-201ENST00000614297 2181 ntBASIC31.47■■■□□ 2.63
SMARCC2Q8TAQ2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCC2Q8TAQ2 AL161658.1-201ENST00000623641 1967 ntBASIC31.46■■■□□ 2.63
SMARCC2Q8TAQ2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
SMARCC2Q8TAQ2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SMARCC2Q8TAQ2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
SMARCC2Q8TAQ2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
SMARCC2Q8TAQ2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCC2Q8TAQ2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC31.44■■■□□ 2.62
SMARCC2Q8TAQ2 AL391121.1-201ENST00000607967 1349 ntBASIC31.44■■■□□ 2.62
SMARCC2Q8TAQ2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCC2Q8TAQ2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SMARCC2Q8TAQ2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMARCC2Q8TAQ2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMARCC2Q8TAQ2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SMARCC2Q8TAQ2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.4■■■□□ 2.62
SMARCC2Q8TAQ2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCC2Q8TAQ2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.61
SMARCC2Q8TAQ2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCC2Q8TAQ2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCC2Q8TAQ2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCC2Q8TAQ2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SMARCC2Q8TAQ2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
SMARCC2Q8TAQ2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SMARCC2Q8TAQ2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SMARCC2Q8TAQ2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SMARCC2Q8TAQ2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SMARCC2Q8TAQ2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SMARCC2Q8TAQ2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SMARCC2Q8TAQ2 WASH5P-204ENST00000632292 975 ntBASIC31.32■■■□□ 2.6
SMARCC2Q8TAQ2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
SMARCC2Q8TAQ2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms