Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDRT4Q8N9R6 RARRES2P7-201ENST00000567349 469 ntBASIC25.25■■□□□ 1.63
CDRT4Q8N9R6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDRT4Q8N9R6 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CDRT4Q8N9R6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDRT4Q8N9R6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CDRT4Q8N9R6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.24■■□□□ 1.63
CDRT4Q8N9R6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CDRT4Q8N9R6 AL133380.1-201ENST00000506013 324 ntBASIC25.23■■□□□ 1.63
CDRT4Q8N9R6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDRT4Q8N9R6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.21■■□□□ 1.63
CDRT4Q8N9R6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.2■■□□□ 1.62
CDRT4Q8N9R6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDRT4Q8N9R6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CDRT4Q8N9R6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CDRT4Q8N9R6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.18■■□□□ 1.62
CDRT4Q8N9R6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.16■■□□□ 1.62
CDRT4Q8N9R6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CDRT4Q8N9R6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CDRT4Q8N9R6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CDRT4Q8N9R6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CDRT4Q8N9R6 SETD8P1-201ENST00000623146 1180 ntBASIC25.14■■□□□ 1.62
CDRT4Q8N9R6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
CDRT4Q8N9R6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDRT4Q8N9R6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CDRT4Q8N9R6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CDRT4Q8N9R6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
CDRT4Q8N9R6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CDRT4Q8N9R6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CDRT4Q8N9R6 WASH5P-204ENST00000632292 975 ntBASIC25.11■■□□□ 1.61
CDRT4Q8N9R6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.11■■□□□ 1.61
CDRT4Q8N9R6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CDRT4Q8N9R6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDRT4Q8N9R6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
CDRT4Q8N9R6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CDRT4Q8N9R6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
CDRT4Q8N9R6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
CDRT4Q8N9R6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDRT4Q8N9R6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDRT4Q8N9R6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CDRT4Q8N9R6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CDRT4Q8N9R6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.05■■□□□ 1.6
CDRT4Q8N9R6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.05■■□□□ 1.6
CDRT4Q8N9R6 AL161658.1-201ENST00000623641 1967 ntBASIC25.03■■□□□ 1.6
CDRT4Q8N9R6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CDRT4Q8N9R6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CDRT4Q8N9R6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.02■■□□□ 1.6
CDRT4Q8N9R6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CDRT4Q8N9R6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDRT4Q8N9R6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CDRT4Q8N9R6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDRT4Q8N9R6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.98■■□□□ 1.59
CDRT4Q8N9R6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDRT4Q8N9R6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDRT4Q8N9R6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDRT4Q8N9R6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CDRT4Q8N9R6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
CDRT4Q8N9R6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.95■■□□□ 1.58
CDRT4Q8N9R6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
CDRT4Q8N9R6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CDRT4Q8N9R6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CDRT4Q8N9R6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CDRT4Q8N9R6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
CDRT4Q8N9R6 AC097358.2-201ENST00000607541 1159 ntBASIC24.92■■□□□ 1.58
CDRT4Q8N9R6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
CDRT4Q8N9R6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.9■■□□□ 1.58
CDRT4Q8N9R6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CDRT4Q8N9R6 AC136428.2-201ENST00000563187 214 ntBASIC24.9■■□□□ 1.58
CDRT4Q8N9R6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CDRT4Q8N9R6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CDRT4Q8N9R6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
CDRT4Q8N9R6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CDRT4Q8N9R6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CDRT4Q8N9R6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CDRT4Q8N9R6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
CDRT4Q8N9R6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC24.88■■□□□ 1.57
CDRT4Q8N9R6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CDRT4Q8N9R6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.88■■□□□ 1.57
CDRT4Q8N9R6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.88■■□□□ 1.57
CDRT4Q8N9R6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDRT4Q8N9R6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CDRT4Q8N9R6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDRT4Q8N9R6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CDRT4Q8N9R6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
CDRT4Q8N9R6 AL391121.1-201ENST00000607967 1349 ntBASIC24.86■■□□□ 1.57
CDRT4Q8N9R6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDRT4Q8N9R6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDRT4Q8N9R6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDRT4Q8N9R6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.85■■□□□ 1.57
CDRT4Q8N9R6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDRT4Q8N9R6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDRT4Q8N9R6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
CDRT4Q8N9R6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDRT4Q8N9R6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
CDRT4Q8N9R6 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.83■■□□□ 1.56
CDRT4Q8N9R6 CAHM-201ENST00000604200 896 ntBASIC24.82■■□□□ 1.56
CDRT4Q8N9R6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDRT4Q8N9R6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.81■■□□□ 1.56
CDRT4Q8N9R6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.81■■□□□ 1.56
CDRT4Q8N9R6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms