Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
C11orf42Q8N5U0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
C11orf42Q8N5U0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
C11orf42Q8N5U0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
C11orf42Q8N5U0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
C11orf42Q8N5U0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
C11orf42Q8N5U0 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
C11orf42Q8N5U0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
C11orf42Q8N5U0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
C11orf42Q8N5U0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
C11orf42Q8N5U0 CAHM-201ENST00000604200 896 ntBASIC22.38■■□□□ 1.17
C11orf42Q8N5U0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.37■■□□□ 1.17
C11orf42Q8N5U0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
C11orf42Q8N5U0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
C11orf42Q8N5U0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
C11orf42Q8N5U0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
C11orf42Q8N5U0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
C11orf42Q8N5U0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
C11orf42Q8N5U0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
C11orf42Q8N5U0 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
C11orf42Q8N5U0 WASH5P-204ENST00000632292 975 ntBASIC22.33■■□□□ 1.17
C11orf42Q8N5U0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
C11orf42Q8N5U0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
C11orf42Q8N5U0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
C11orf42Q8N5U0 AL391121.1-201ENST00000607967 1349 ntBASIC22.31■■□□□ 1.16
C11orf42Q8N5U0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
C11orf42Q8N5U0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.3■■□□□ 1.16
C11orf42Q8N5U0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
C11orf42Q8N5U0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
C11orf42Q8N5U0 SUZ12P1-203ENST00000578195 985 ntBASIC22.28■■□□□ 1.16
C11orf42Q8N5U0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
C11orf42Q8N5U0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
C11orf42Q8N5U0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
C11orf42Q8N5U0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
C11orf42Q8N5U0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C11orf42Q8N5U0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C11orf42Q8N5U0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C11orf42Q8N5U0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C11orf42Q8N5U0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.25■■□□□ 1.15
C11orf42Q8N5U0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
C11orf42Q8N5U0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
C11orf42Q8N5U0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.24■■□□□ 1.15
C11orf42Q8N5U0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
C11orf42Q8N5U0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
C11orf42Q8N5U0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C11orf42Q8N5U0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
C11orf42Q8N5U0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C11orf42Q8N5U0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
C11orf42Q8N5U0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
C11orf42Q8N5U0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
C11orf42Q8N5U0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
C11orf42Q8N5U0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
C11orf42Q8N5U0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
C11orf42Q8N5U0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
C11orf42Q8N5U0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.19■■□□□ 1.14
C11orf42Q8N5U0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
C11orf42Q8N5U0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
C11orf42Q8N5U0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
C11orf42Q8N5U0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.16■■□□□ 1.14
C11orf42Q8N5U0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
C11orf42Q8N5U0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.14■■□□□ 1.13
C11orf42Q8N5U0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.13■■□□□ 1.13
C11orf42Q8N5U0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
C11orf42Q8N5U0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC22.13■■□□□ 1.13
C11orf42Q8N5U0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
C11orf42Q8N5U0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC22.11■■□□□ 1.13
C11orf42Q8N5U0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
C11orf42Q8N5U0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC22.11■■□□□ 1.13
C11orf42Q8N5U0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
C11orf42Q8N5U0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.1■■□□□ 1.13
C11orf42Q8N5U0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
C11orf42Q8N5U0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
C11orf42Q8N5U0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.09■■□□□ 1.13
C11orf42Q8N5U0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
C11orf42Q8N5U0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
C11orf42Q8N5U0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.08■■□□□ 1.13
C11orf42Q8N5U0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
C11orf42Q8N5U0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
C11orf42Q8N5U0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
C11orf42Q8N5U0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.07■■□□□ 1.12
C11orf42Q8N5U0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
C11orf42Q8N5U0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
C11orf42Q8N5U0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
C11orf42Q8N5U0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
C11orf42Q8N5U0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.05■■□□□ 1.12
C11orf42Q8N5U0 AL161658.1-201ENST00000623641 1967 ntBASIC22.05■■□□□ 1.12
C11orf42Q8N5U0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC22.04■■□□□ 1.12
C11orf42Q8N5U0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
C11orf42Q8N5U0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
C11orf42Q8N5U0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
C11orf42Q8N5U0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
C11orf42Q8N5U0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
C11orf42Q8N5U0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.01■■□□□ 1.11
C11orf42Q8N5U0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
C11orf42Q8N5U0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
C11orf42Q8N5U0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
C11orf42Q8N5U0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
C11orf42Q8N5U0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
C11orf42Q8N5U0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
C11orf42Q8N5U0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms