Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RAB42Q8N4Z0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAB42Q8N4Z0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
RAB42Q8N4Z0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RAB42Q8N4Z0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RAB42Q8N4Z0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.36■■□□□ 1.81
RAB42Q8N4Z0 WASH5P-204ENST00000632292 975 ntBASIC26.36■■□□□ 1.81
RAB42Q8N4Z0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RAB42Q8N4Z0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RAB42Q8N4Z0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.34■■□□□ 1.81
RAB42Q8N4Z0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.33■■□□□ 1.81
RAB42Q8N4Z0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
RAB42Q8N4Z0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RAB42Q8N4Z0 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAB42Q8N4Z0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAB42Q8N4Z0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.31■■□□□ 1.8
RAB42Q8N4Z0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RAB42Q8N4Z0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.3■■□□□ 1.8
RAB42Q8N4Z0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RAB42Q8N4Z0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.29■■□□□ 1.8
RAB42Q8N4Z0 AL391121.1-201ENST00000607967 1349 ntBASIC26.29■■□□□ 1.8
RAB42Q8N4Z0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.29■■□□□ 1.8
RAB42Q8N4Z0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RAB42Q8N4Z0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RAB42Q8N4Z0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RAB42Q8N4Z0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.25■■□□□ 1.79
RAB42Q8N4Z0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RAB42Q8N4Z0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RAB42Q8N4Z0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
RAB42Q8N4Z0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.23■■□□□ 1.79
RAB42Q8N4Z0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.23■■□□□ 1.79
RAB42Q8N4Z0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RAB42Q8N4Z0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RAB42Q8N4Z0 CAHM-201ENST00000604200 896 ntBASIC26.22■■□□□ 1.79
RAB42Q8N4Z0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RAB42Q8N4Z0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RAB42Q8N4Z0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.22■■□□□ 1.79
RAB42Q8N4Z0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
RAB42Q8N4Z0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAB42Q8N4Z0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RAB42Q8N4Z0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RAB42Q8N4Z0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.18■■□□□ 1.78
RAB42Q8N4Z0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RAB42Q8N4Z0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RAB42Q8N4Z0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
RAB42Q8N4Z0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.17■■□□□ 1.78
RAB42Q8N4Z0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RAB42Q8N4Z0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RAB42Q8N4Z0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RAB42Q8N4Z0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RAB42Q8N4Z0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
RAB42Q8N4Z0 SUZ12P1-203ENST00000578195 985 ntBASIC26.11■■□□□ 1.77
RAB42Q8N4Z0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
RAB42Q8N4Z0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RAB42Q8N4Z0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RAB42Q8N4Z0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RAB42Q8N4Z0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.09■■□□□ 1.77
RAB42Q8N4Z0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.09■■□□□ 1.77
RAB42Q8N4Z0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RAB42Q8N4Z0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.08■■□□□ 1.77
RAB42Q8N4Z0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RAB42Q8N4Z0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
RAB42Q8N4Z0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.06■■□□□ 1.76
RAB42Q8N4Z0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RAB42Q8N4Z0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RAB42Q8N4Z0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RAB42Q8N4Z0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RAB42Q8N4Z0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RAB42Q8N4Z0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.03■■□□□ 1.76
RAB42Q8N4Z0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RAB42Q8N4Z0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RAB42Q8N4Z0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.02■■□□□ 1.76
RAB42Q8N4Z0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
RAB42Q8N4Z0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RAB42Q8N4Z0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RAB42Q8N4Z0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.99■■□□□ 1.75
RAB42Q8N4Z0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RAB42Q8N4Z0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.98■■□□□ 1.75
RAB42Q8N4Z0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RAB42Q8N4Z0 AL161658.1-201ENST00000623641 1967 ntBASIC25.98■■□□□ 1.75
RAB42Q8N4Z0 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.98■■□□□ 1.75
RAB42Q8N4Z0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
RAB42Q8N4Z0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RAB42Q8N4Z0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
RAB42Q8N4Z0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.97■■□□□ 1.75
RAB42Q8N4Z0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RAB42Q8N4Z0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
RAB42Q8N4Z0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
RAB42Q8N4Z0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RAB42Q8N4Z0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.95■■□□□ 1.74
RAB42Q8N4Z0 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.95■■□□□ 1.74
RAB42Q8N4Z0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RAB42Q8N4Z0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
RAB42Q8N4Z0 MIR762-201ENST00000390236 83 ntBASIC25.93■■□□□ 1.74
RAB42Q8N4Z0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RAB42Q8N4Z0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
RAB42Q8N4Z0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAB42Q8N4Z0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAB42Q8N4Z0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RAB42Q8N4Z0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms