Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SIX5Q8N196 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SIX5Q8N196 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SIX5Q8N196 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SIX5Q8N196 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SIX5Q8N196 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.29■■■□□ 2.12
SIX5Q8N196 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.28■■■□□ 2.12
SIX5Q8N196 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
SIX5Q8N196 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SIX5Q8N196 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SIX5Q8N196 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.24■■■□□ 2.11
SIX5Q8N196 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
SIX5Q8N196 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.23■■■□□ 2.11
SIX5Q8N196 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SIX5Q8N196 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SIX5Q8N196 DUX4L29-201ENST00000425409 679 ntBASIC28.22■■■□□ 2.11
SIX5Q8N196 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.21■■■□□ 2.11
SIX5Q8N196 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.21■■■□□ 2.11
SIX5Q8N196 MIR4449-201ENST00000578365 66 ntBASIC28.21■■■□□ 2.11
SIX5Q8N196 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SIX5Q8N196 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC28.2■■■□□ 2.11
SIX5Q8N196 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SIX5Q8N196 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SIX5Q8N196 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
SIX5Q8N196 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
SIX5Q8N196 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.14■■■□□ 2.1
SIX5Q8N196 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SIX5Q8N196 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
SIX5Q8N196 WASH5P-204ENST00000632292 975 ntBASIC28.13■■■□□ 2.09
SIX5Q8N196 MIR639-201ENST00000384974 98 ntBASIC28.12■■■□□ 2.09
SIX5Q8N196 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SIX5Q8N196 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.1■■■□□ 2.09
SIX5Q8N196 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SIX5Q8N196 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SIX5Q8N196 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SIX5Q8N196 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.06■■■□□ 2.08
SIX5Q8N196 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.05■■■□□ 2.08
SIX5Q8N196 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SIX5Q8N196 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.05■■■□□ 2.08
SIX5Q8N196 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.05■■■□□ 2.08
SIX5Q8N196 AC021231.2-201ENST00000594613 730 ntBASIC28.05■■■□□ 2.08
SIX5Q8N196 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
SIX5Q8N196 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
SIX5Q8N196 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.03■■■□□ 2.08
SIX5Q8N196 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SIX5Q8N196 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
SIX5Q8N196 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28■■■□□ 2.07
SIX5Q8N196 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
SIX5Q8N196 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
SIX5Q8N196 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
SIX5Q8N196 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SIX5Q8N196 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SIX5Q8N196 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.98■■■□□ 2.07
SIX5Q8N196 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.98■■■□□ 2.07
SIX5Q8N196 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
SIX5Q8N196 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
SIX5Q8N196 HSD17B1P1-201ENST00000590052 955 ntBASIC27.97■■■□□ 2.07
SIX5Q8N196 AC016575.1-201ENST00000607026 382 ntBASIC27.97■■■□□ 2.07
SIX5Q8N196 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.97■■■□□ 2.07
SIX5Q8N196 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SIX5Q8N196 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SIX5Q8N196 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SIX5Q8N196 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
SIX5Q8N196 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.95■■■□□ 2.06
SIX5Q8N196 MIR3648-2-201ENST00000581792 180 ntBASIC27.94■■■□□ 2.06
SIX5Q8N196 MIR3648-1-201ENST00000615959 180 ntBASIC27.94■■■□□ 2.06
SIX5Q8N196 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
SIX5Q8N196 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
SIX5Q8N196 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
SIX5Q8N196 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
SIX5Q8N196 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.93■■■□□ 2.06
SIX5Q8N196 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
SIX5Q8N196 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.92■■■□□ 2.06
SIX5Q8N196 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.9■■■□□ 2.06
SIX5Q8N196 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.89■■■□□ 2.06
SIX5Q8N196 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SIX5Q8N196 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
SIX5Q8N196 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
SIX5Q8N196 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.85■■■□□ 2.05
SIX5Q8N196 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
SIX5Q8N196 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
SIX5Q8N196 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.83■■■□□ 2.05
SIX5Q8N196 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.81■■■□□ 2.04
SIX5Q8N196 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
SIX5Q8N196 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.8■■■□□ 2.04
SIX5Q8N196 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
SIX5Q8N196 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.8■■■□□ 2.04
SIX5Q8N196 AC108673.1-201ENST00000510422 1159 ntBASIC27.8■■■□□ 2.04
SIX5Q8N196 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
SIX5Q8N196 MIR6090-201ENST00000622481 60 ntBASIC27.79■■■□□ 2.04
SIX5Q8N196 CR559946.2-201ENST00000623684 991 ntBASIC27.79■■■□□ 2.04
SIX5Q8N196 DUX4L11-201ENST00000611504 1267 ntBASIC27.78■■■□□ 2.04
SIX5Q8N196 DUX4L12-201ENST00000614593 1267 ntBASIC27.78■■■□□ 2.04
SIX5Q8N196 DUX4L14-201ENST00000621227 1267 ntBASIC27.78■■■□□ 2.04
SIX5Q8N196 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
SIX5Q8N196 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SIX5Q8N196 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SIX5Q8N196 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
SIX5Q8N196 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.77■■■□□ 2.04
SIX5Q8N196 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.77■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms