Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Clrn1Q8K445 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Clrn1Q8K445 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.91■■□□□ 1.42
Clrn1Q8K445 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Clrn1Q8K445 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Clrn1Q8K445 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Clrn1Q8K445 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Clrn1Q8K445 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Clrn1Q8K445 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Clrn1Q8K445 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Clrn1Q8K445 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Clrn1Q8K445 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.86■■□□□ 1.41
Clrn1Q8K445 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Clrn1Q8K445 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Clrn1Q8K445 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Clrn1Q8K445 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Clrn1Q8K445 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.84■■□□□ 1.41
Clrn1Q8K445 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Clrn1Q8K445 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Clrn1Q8K445 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Clrn1Q8K445 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Clrn1Q8K445 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Clrn1Q8K445 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Clrn1Q8K445 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Clrn1Q8K445 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Clrn1Q8K445 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Clrn1Q8K445 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Clrn1Q8K445 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Clrn1Q8K445 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Clrn1Q8K445 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Clrn1Q8K445 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.73■■□□□ 1.39
Clrn1Q8K445 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Clrn1Q8K445 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Clrn1Q8K445 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.7■■□□□ 1.38
Clrn1Q8K445 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Clrn1Q8K445 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.7■■□□□ 1.38
Clrn1Q8K445 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Clrn1Q8K445 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
Clrn1Q8K445 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Clrn1Q8K445 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Clrn1Q8K445 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Clrn1Q8K445 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Clrn1Q8K445 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Clrn1Q8K445 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Clrn1Q8K445 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Clrn1Q8K445 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Clrn1Q8K445 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Clrn1Q8K445 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Clrn1Q8K445 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Clrn1Q8K445 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Clrn1Q8K445 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
Clrn1Q8K445 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Clrn1Q8K445 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Clrn1Q8K445 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Clrn1Q8K445 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Clrn1Q8K445 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Clrn1Q8K445 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.59■■□□□ 1.37
Clrn1Q8K445 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Clrn1Q8K445 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Clrn1Q8K445 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
Clrn1Q8K445 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.57■■□□□ 1.36
Clrn1Q8K445 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Clrn1Q8K445 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
Clrn1Q8K445 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Clrn1Q8K445 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Clrn1Q8K445 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Clrn1Q8K445 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Clrn1Q8K445 Zfp131-205ENSMUST00000223812 663 ntBASIC23.53■■□□□ 1.36
Clrn1Q8K445 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
Clrn1Q8K445 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Clrn1Q8K445 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Clrn1Q8K445 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Clrn1Q8K445 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Clrn1Q8K445 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Clrn1Q8K445 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Clrn1Q8K445 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Clrn1Q8K445 Zxda-201ENSMUST00000117281 2621 ntBASIC23.48■■□□□ 1.35
Clrn1Q8K445 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Clrn1Q8K445 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Clrn1Q8K445 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Clrn1Q8K445 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Clrn1Q8K445 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Clrn1Q8K445 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Clrn1Q8K445 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.43■■□□□ 1.34
Clrn1Q8K445 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.42■■□□□ 1.34
Clrn1Q8K445 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Clrn1Q8K445 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Clrn1Q8K445 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Clrn1Q8K445 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Clrn1Q8K445 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Clrn1Q8K445 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Clrn1Q8K445 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Clrn1Q8K445 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.39■■□□□ 1.33
Clrn1Q8K445 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Clrn1Q8K445 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.39■■□□□ 1.33
Clrn1Q8K445 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Clrn1Q8K445 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Clrn1Q8K445 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Clrn1Q8K445 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Clrn1Q8K445 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms