Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Sox30Q8CGW4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Sox30Q8CGW4 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.17■■■□□ 2.1
Sox30Q8CGW4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Sox30Q8CGW4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Sox30Q8CGW4 Amer2-203ENSMUST00000225247 2662 ntBASIC28.15■■■□□ 2.1
Sox30Q8CGW4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Sox30Q8CGW4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Sox30Q8CGW4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Sox30Q8CGW4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.14■■■□□ 2.1
Sox30Q8CGW4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.13■■■□□ 2.09
Sox30Q8CGW4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sox30Q8CGW4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Sox30Q8CGW4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sox30Q8CGW4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sox30Q8CGW4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Sox30Q8CGW4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Sox30Q8CGW4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.1■■■□□ 2.09
Sox30Q8CGW4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Sox30Q8CGW4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Sox30Q8CGW4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.08■■■□□ 2.09
Sox30Q8CGW4 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.08■■■□□ 2.09
Sox30Q8CGW4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Sox30Q8CGW4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.06■■■□□ 2.08
Sox30Q8CGW4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Sox30Q8CGW4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.04■■■□□ 2.08
Sox30Q8CGW4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.04■■■□□ 2.08
Sox30Q8CGW4 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.03■■■□□ 2.08
Sox30Q8CGW4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
Sox30Q8CGW4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.01■■■□□ 2.08
Sox30Q8CGW4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
Sox30Q8CGW4 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.99■■■□□ 2.07
Sox30Q8CGW4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.98■■■□□ 2.07
Sox30Q8CGW4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Sox30Q8CGW4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.96■■■□□ 2.07
Sox30Q8CGW4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Sox30Q8CGW4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Sox30Q8CGW4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.95■■■□□ 2.07
Sox30Q8CGW4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Sox30Q8CGW4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Sox30Q8CGW4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Sox30Q8CGW4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.93■■■□□ 2.06
Sox30Q8CGW4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
Sox30Q8CGW4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
Sox30Q8CGW4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sox30Q8CGW4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.92■■■□□ 2.06
Sox30Q8CGW4 Gm27322-201ENSMUST00000184007 104 ntBASIC27.92■■■□□ 2.06
Sox30Q8CGW4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sox30Q8CGW4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Sox30Q8CGW4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.91■■■□□ 2.06
Sox30Q8CGW4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Sox30Q8CGW4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Sox30Q8CGW4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Sox30Q8CGW4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.9■■■□□ 2.06
Sox30Q8CGW4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Sox30Q8CGW4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
Sox30Q8CGW4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.87■■■□□ 2.05
Sox30Q8CGW4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Sox30Q8CGW4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Sox30Q8CGW4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Sox30Q8CGW4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
Sox30Q8CGW4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Sox30Q8CGW4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Sox30Q8CGW4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Sox30Q8CGW4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Sox30Q8CGW4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Sox30Q8CGW4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sox30Q8CGW4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Sox30Q8CGW4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Sox30Q8CGW4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Sox30Q8CGW4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Sox30Q8CGW4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Sox30Q8CGW4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Sox30Q8CGW4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Sox30Q8CGW4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Sox30Q8CGW4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Sox30Q8CGW4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Sox30Q8CGW4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Sox30Q8CGW4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Sox30Q8CGW4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Sox30Q8CGW4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Sox30Q8CGW4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Sox30Q8CGW4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Sox30Q8CGW4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.67■■■□□ 2.02
Sox30Q8CGW4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.67■■■□□ 2.02
Sox30Q8CGW4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.67■■■□□ 2.02
Sox30Q8CGW4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Sox30Q8CGW4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Sox30Q8CGW4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Sox30Q8CGW4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
Sox30Q8CGW4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Sox30Q8CGW4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Sox30Q8CGW4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Sox30Q8CGW4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Sox30Q8CGW4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.58■■■□□ 2
Sox30Q8CGW4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Sox30Q8CGW4 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
Sox30Q8CGW4 Peli2-204ENSMUST00000226513 1320 ntBASIC27.57■■■□□ 2
Sox30Q8CGW4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Sox30Q8CGW4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms