Protein–RNA interactions for Protein: Q8CF20

1700020N01Rik, RIKEN cDNA 1700020N01, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700020N01RikQ8CF20 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
1700020N01RikQ8CF20 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
1700020N01RikQ8CF20 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
1700020N01RikQ8CF20 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
1700020N01RikQ8CF20 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
1700020N01RikQ8CF20 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
1700020N01RikQ8CF20 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
1700020N01RikQ8CF20 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
1700020N01RikQ8CF20 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
1700020N01RikQ8CF20 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
1700020N01RikQ8CF20 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
1700020N01RikQ8CF20 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.37■■□□□ 1.33
1700020N01RikQ8CF20 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
1700020N01RikQ8CF20 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
1700020N01RikQ8CF20 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
1700020N01RikQ8CF20 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
1700020N01RikQ8CF20 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
1700020N01RikQ8CF20 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
1700020N01RikQ8CF20 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
1700020N01RikQ8CF20 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
1700020N01RikQ8CF20 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.34■■□□□ 1.33
1700020N01RikQ8CF20 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.34■■□□□ 1.33
1700020N01RikQ8CF20 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.33■■□□□ 1.33
1700020N01RikQ8CF20 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
1700020N01RikQ8CF20 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
1700020N01RikQ8CF20 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
1700020N01RikQ8CF20 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.32■■□□□ 1.32
1700020N01RikQ8CF20 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
1700020N01RikQ8CF20 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
1700020N01RikQ8CF20 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
1700020N01RikQ8CF20 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
1700020N01RikQ8CF20 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.3■■□□□ 1.32
1700020N01RikQ8CF20 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
1700020N01RikQ8CF20 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
1700020N01RikQ8CF20 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
1700020N01RikQ8CF20 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.27■■□□□ 1.32
1700020N01RikQ8CF20 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.26■■□□□ 1.31
1700020N01RikQ8CF20 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
1700020N01RikQ8CF20 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
1700020N01RikQ8CF20 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
1700020N01RikQ8CF20 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
1700020N01RikQ8CF20 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.25■■□□□ 1.31
1700020N01RikQ8CF20 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
1700020N01RikQ8CF20 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
1700020N01RikQ8CF20 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.24■■□□□ 1.31
1700020N01RikQ8CF20 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
1700020N01RikQ8CF20 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
1700020N01RikQ8CF20 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
1700020N01RikQ8CF20 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
1700020N01RikQ8CF20 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
1700020N01RikQ8CF20 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
1700020N01RikQ8CF20 Gm27322-201ENSMUST00000184007 104 ntBASIC23.21■■□□□ 1.31
1700020N01RikQ8CF20 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.21■■□□□ 1.31
1700020N01RikQ8CF20 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
1700020N01RikQ8CF20 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.21■■□□□ 1.31
1700020N01RikQ8CF20 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
1700020N01RikQ8CF20 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
1700020N01RikQ8CF20 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
1700020N01RikQ8CF20 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
1700020N01RikQ8CF20 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
1700020N01RikQ8CF20 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
1700020N01RikQ8CF20 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.17■■□□□ 1.3
1700020N01RikQ8CF20 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
1700020N01RikQ8CF20 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
1700020N01RikQ8CF20 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.16■■□□□ 1.3
1700020N01RikQ8CF20 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
1700020N01RikQ8CF20 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
1700020N01RikQ8CF20 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
1700020N01RikQ8CF20 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.15■■□□□ 1.3
1700020N01RikQ8CF20 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
1700020N01RikQ8CF20 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
1700020N01RikQ8CF20 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
1700020N01RikQ8CF20 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
1700020N01RikQ8CF20 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
1700020N01RikQ8CF20 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.11■■□□□ 1.29
1700020N01RikQ8CF20 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
1700020N01RikQ8CF20 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
1700020N01RikQ8CF20 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
1700020N01RikQ8CF20 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
1700020N01RikQ8CF20 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
1700020N01RikQ8CF20 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
1700020N01RikQ8CF20 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
1700020N01RikQ8CF20 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
1700020N01RikQ8CF20 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
1700020N01RikQ8CF20 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
1700020N01RikQ8CF20 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
1700020N01RikQ8CF20 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
1700020N01RikQ8CF20 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
1700020N01RikQ8CF20 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.04■■□□□ 1.28
1700020N01RikQ8CF20 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
1700020N01RikQ8CF20 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
1700020N01RikQ8CF20 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
1700020N01RikQ8CF20 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
1700020N01RikQ8CF20 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.02■■□□□ 1.28
1700020N01RikQ8CF20 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
1700020N01RikQ8CF20 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
1700020N01RikQ8CF20 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
1700020N01RikQ8CF20 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
1700020N01RikQ8CF20 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.98■■□□□ 1.27
1700020N01RikQ8CF20 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms