Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
CPNE8Q86YQ8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CPNE8Q86YQ8 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CPNE8Q86YQ8 ABCB10P1-201ENST00000614297 2181 ntBASIC28.62■■■□□ 2.17
CPNE8Q86YQ8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CPNE8Q86YQ8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
CPNE8Q86YQ8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.59■■■□□ 2.17
CPNE8Q86YQ8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.59■■■□□ 2.17
CPNE8Q86YQ8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CPNE8Q86YQ8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.58■■■□□ 2.17
CPNE8Q86YQ8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.58■■■□□ 2.17
CPNE8Q86YQ8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
CPNE8Q86YQ8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
CPNE8Q86YQ8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CPNE8Q86YQ8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.53■■■□□ 2.16
CPNE8Q86YQ8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.51■■■□□ 2.16
CPNE8Q86YQ8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
CPNE8Q86YQ8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CPNE8Q86YQ8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
CPNE8Q86YQ8 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
CPNE8Q86YQ8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
CPNE8Q86YQ8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC28.46■■■□□ 2.15
CPNE8Q86YQ8 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
CPNE8Q86YQ8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
CPNE8Q86YQ8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CPNE8Q86YQ8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CPNE8Q86YQ8 AL161658.1-201ENST00000623641 1967 ntBASIC28.42■■■□□ 2.14
CPNE8Q86YQ8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CPNE8Q86YQ8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.41■■■□□ 2.14
CPNE8Q86YQ8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.41■■■□□ 2.14
CPNE8Q86YQ8 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CPNE8Q86YQ8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CPNE8Q86YQ8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.38■■■□□ 2.13
CPNE8Q86YQ8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CPNE8Q86YQ8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CPNE8Q86YQ8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CPNE8Q86YQ8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CPNE8Q86YQ8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CPNE8Q86YQ8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.35■■■□□ 2.13
CPNE8Q86YQ8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CPNE8Q86YQ8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CPNE8Q86YQ8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
CPNE8Q86YQ8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CPNE8Q86YQ8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CPNE8Q86YQ8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.32■■■□□ 2.12
CPNE8Q86YQ8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
CPNE8Q86YQ8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CPNE8Q86YQ8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CPNE8Q86YQ8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.3■■■□□ 2.12
CPNE8Q86YQ8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CPNE8Q86YQ8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CPNE8Q86YQ8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CPNE8Q86YQ8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CPNE8Q86YQ8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CPNE8Q86YQ8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
CPNE8Q86YQ8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CPNE8Q86YQ8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CPNE8Q86YQ8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CPNE8Q86YQ8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.26■■■□□ 2.11
CPNE8Q86YQ8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
CPNE8Q86YQ8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CPNE8Q86YQ8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.24■■■□□ 2.11
CPNE8Q86YQ8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.24■■■□□ 2.11
CPNE8Q86YQ8 AC139426.1-201ENST00000568218 2529 ntBASIC28.24■■■□□ 2.11
CPNE8Q86YQ8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CPNE8Q86YQ8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
CPNE8Q86YQ8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CPNE8Q86YQ8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.22■■■□□ 2.11
CPNE8Q86YQ8 ABCB10P3-201ENST00000561950 2166 ntBASIC28.22■■■□□ 2.11
CPNE8Q86YQ8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.22■■■□□ 2.11
CPNE8Q86YQ8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
CPNE8Q86YQ8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
CPNE8Q86YQ8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CPNE8Q86YQ8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CPNE8Q86YQ8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.18■■■□□ 2.1
CPNE8Q86YQ8 AL133380.1-201ENST00000506013 324 ntBASIC28.18■■■□□ 2.1
CPNE8Q86YQ8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CPNE8Q86YQ8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CPNE8Q86YQ8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.17■■■□□ 2.1
CPNE8Q86YQ8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CPNE8Q86YQ8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CPNE8Q86YQ8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.16■■■□□ 2.1
CPNE8Q86YQ8 ST7-AS1-201ENST00000456775 1889 ntBASIC28.15■■■□□ 2.1
CPNE8Q86YQ8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.14■■■□□ 2.1
CPNE8Q86YQ8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.09
CPNE8Q86YQ8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CPNE8Q86YQ8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CPNE8Q86YQ8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CPNE8Q86YQ8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CPNE8Q86YQ8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
CPNE8Q86YQ8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
CPNE8Q86YQ8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CPNE8Q86YQ8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CPNE8Q86YQ8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CPNE8Q86YQ8 WASH5P-204ENST00000632292 975 ntBASIC28.1■■■□□ 2.09
CPNE8Q86YQ8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CPNE8Q86YQ8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.09■■■□□ 2.09
CPNE8Q86YQ8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CPNE8Q86YQ8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CPNE8Q86YQ8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms