Protein–RNA interactions for Protein: Q86UP0

CDH24, Cadherin-24, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24Q86UP0 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDH24Q86UP0 ABHD17AP4-201ENST00000411545 909 ntBASIC24.44■■□□□ 1.5
CDH24Q86UP0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDH24Q86UP0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDH24Q86UP0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDH24Q86UP0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.43■■□□□ 1.5
CDH24Q86UP0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDH24Q86UP0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDH24Q86UP0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.42■■□□□ 1.5
CDH24Q86UP0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDH24Q86UP0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDH24Q86UP0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDH24Q86UP0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.41■■□□□ 1.5
CDH24Q86UP0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDH24Q86UP0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CDH24Q86UP0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.4■■□□□ 1.5
CDH24Q86UP0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDH24Q86UP0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.4■■□□□ 1.5
CDH24Q86UP0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDH24Q86UP0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDH24Q86UP0 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.39■■□□□ 1.5
CDH24Q86UP0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.39■■□□□ 1.49
CDH24Q86UP0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDH24Q86UP0 AL391121.1-201ENST00000607967 1349 ntBASIC24.38■■□□□ 1.49
CDH24Q86UP0 HLA-V-202ENST00000446817 847 ntBASIC24.38■■□□□ 1.49
CDH24Q86UP0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDH24Q86UP0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDH24Q86UP0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDH24Q86UP0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.37■■□□□ 1.49
CDH24Q86UP0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.35■■□□□ 1.49
CDH24Q86UP0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
CDH24Q86UP0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDH24Q86UP0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDH24Q86UP0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.32■■□□□ 1.48
CDH24Q86UP0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
CDH24Q86UP0 AC139426.1-201ENST00000568218 2529 ntBASIC24.32■■□□□ 1.48
CDH24Q86UP0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CDH24Q86UP0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CDH24Q86UP0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
CDH24Q86UP0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDH24Q86UP0 MIR3665-201ENST00000578708 105 ntBASIC24.3■■□□□ 1.48
CDH24Q86UP0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CDH24Q86UP0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.29■■□□□ 1.48
CDH24Q86UP0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CDH24Q86UP0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.27■■□□□ 1.48
CDH24Q86UP0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDH24Q86UP0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDH24Q86UP0 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
CDH24Q86UP0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDH24Q86UP0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDH24Q86UP0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDH24Q86UP0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CDH24Q86UP0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.23■■□□□ 1.47
CDH24Q86UP0 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.23■■□□□ 1.47
CDH24Q86UP0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.2■■□□□ 1.46
CDH24Q86UP0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.2■■□□□ 1.46
CDH24Q86UP0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CDH24Q86UP0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDH24Q86UP0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CDH24Q86UP0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDH24Q86UP0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CDH24Q86UP0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDH24Q86UP0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDH24Q86UP0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDH24Q86UP0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.17■■□□□ 1.46
CDH24Q86UP0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.17■■□□□ 1.46
CDH24Q86UP0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDH24Q86UP0 AC087741.3-201ENST00000624270 1347 ntBASIC24.16■■□□□ 1.46
CDH24Q86UP0 AL133380.1-201ENST00000506013 324 ntBASIC24.16■■□□□ 1.46
CDH24Q86UP0 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CDH24Q86UP0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDH24Q86UP0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDH24Q86UP0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDH24Q86UP0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDH24Q86UP0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDH24Q86UP0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDH24Q86UP0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDH24Q86UP0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CDH24Q86UP0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDH24Q86UP0 AC044849.2-201ENST00000606596 710 ntBASIC24.14■■□□□ 1.45
CDH24Q86UP0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDH24Q86UP0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDH24Q86UP0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
CDH24Q86UP0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.11■■□□□ 1.45
CDH24Q86UP0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDH24Q86UP0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.1■■□□□ 1.45
CDH24Q86UP0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH24Q86UP0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH24Q86UP0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.09■■□□□ 1.45
CDH24Q86UP0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH24Q86UP0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CDH24Q86UP0 DUX4L28-201ENST00000623687 678 ntBASIC24.08■■□□□ 1.45
CDH24Q86UP0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDH24Q86UP0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDH24Q86UP0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CDH24Q86UP0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
CDH24Q86UP0 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC24.06■■□□□ 1.44
CDH24Q86UP0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDH24Q86UP0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CDH24Q86UP0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms