Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Pcdhga7Q6DD96 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC24.49■■□□□ 1.51
Pcdhga7Q6DD96 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhga7Q6DD96 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhga7Q6DD96 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhga7Q6DD96 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.48■■□□□ 1.51
Pcdhga7Q6DD96 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Pcdhga7Q6DD96 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhga7Q6DD96 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhga7Q6DD96 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Pcdhga7Q6DD96 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhga7Q6DD96 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
Pcdhga7Q6DD96 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhga7Q6DD96 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhga7Q6DD96 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhga7Q6DD96 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
Pcdhga7Q6DD96 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhga7Q6DD96 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.43■■□□□ 1.5
Pcdhga7Q6DD96 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhga7Q6DD96 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Pcdhga7Q6DD96 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.41■■□□□ 1.5
Pcdhga7Q6DD96 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.4■■□□□ 1.5
Pcdhga7Q6DD96 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhga7Q6DD96 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhga7Q6DD96 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.37■■□□□ 1.49
Pcdhga7Q6DD96 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.37■■□□□ 1.49
Pcdhga7Q6DD96 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhga7Q6DD96 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhga7Q6DD96 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhga7Q6DD96 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhga7Q6DD96 Peli2-204ENSMUST00000226513 1320 ntBASIC24.35■■□□□ 1.49
Pcdhga7Q6DD96 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhga7Q6DD96 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhga7Q6DD96 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhga7Q6DD96 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhga7Q6DD96 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhga7Q6DD96 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhga7Q6DD96 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhga7Q6DD96 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Pcdhga7Q6DD96 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhga7Q6DD96 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhga7Q6DD96 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Pcdhga7Q6DD96 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhga7Q6DD96 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.29■■□□□ 1.48
Pcdhga7Q6DD96 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhga7Q6DD96 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Pcdhga7Q6DD96 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhga7Q6DD96 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhga7Q6DD96 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhga7Q6DD96 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhga7Q6DD96 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhga7Q6DD96 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhga7Q6DD96 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Pcdhga7Q6DD96 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Pcdhga7Q6DD96 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhga7Q6DD96 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhga7Q6DD96 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Pcdhga7Q6DD96 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Pcdhga7Q6DD96 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhga7Q6DD96 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pcdhga7Q6DD96 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Pcdhga7Q6DD96 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Pcdhga7Q6DD96 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pcdhga7Q6DD96 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdhga7Q6DD96 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhga7Q6DD96 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhga7Q6DD96 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Pcdhga7Q6DD96 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdhga7Q6DD96 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdhga7Q6DD96 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
Pcdhga7Q6DD96 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdhga7Q6DD96 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.16■■□□□ 1.46
Pcdhga7Q6DD96 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhga7Q6DD96 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhga7Q6DD96 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhga7Q6DD96 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdhga7Q6DD96 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Pcdhga7Q6DD96 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pcdhga7Q6DD96 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdhga7Q6DD96 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhga7Q6DD96 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdhga7Q6DD96 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdhga7Q6DD96 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
Pcdhga7Q6DD96 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdhga7Q6DD96 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Pcdhga7Q6DD96 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Pcdhga7Q6DD96 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhga7Q6DD96 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhga7Q6DD96 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdhga7Q6DD96 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.08■■□□□ 1.45
Pcdhga7Q6DD96 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.08■■□□□ 1.44
Pcdhga7Q6DD96 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhga7Q6DD96 Amer2-203ENSMUST00000225247 2662 ntBASIC24.07■■□□□ 1.44
Pcdhga7Q6DD96 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhga7Q6DD96 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.06■■□□□ 1.44
Pcdhga7Q6DD96 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Pcdhga7Q6DD96 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.04■■□□□ 1.44
Pcdhga7Q6DD96 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhga7Q6DD96 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhga7Q6DD96 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.03■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms